CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74883	Soybean	nucleus	79.81	80.32
KRH22276	Soybean	nucleus	33.33	62.65
KRH27055	Soybean	nucleus	81.41	45.28
Solyc07g055140.2.1	Tomato	nucleus	38.78	34.38
KRH55736	Soybean	nucleus	51.6	23.44
KRH25783	Soybean	nucleus	50.96	22.49
PGSC0003DMT400052652	Potato	nucleus	39.42	20.92
VIT_12s0028g02110.t01	Wine grape	nucleus	42.31	19.47
PGSC0003DMT400039770	Potato	cytosol	33.65	18.32
Solyc12g013960.1.1	Tomato	nucleus	35.58	18.08
AT2G30990.4	Thale cress	nucleus	33.01	17.37
GSMUA_Achr1P04800_001	Banana	nucleus	27.56	16.51
CDY58982	Canola	nucleus	26.92	15.7
Bra021686.1-P	Field mustard	nucleus	26.92	15.7
CDX97772	Canola	extracellular, vacuole	27.24	15.21
CDY52694	Canola	nucleus	22.76	15.11
GSMUA_Achr9P06400_001	Banana	nucleus	31.09	14.59
GSMUA_Achr6P26820_001	Banana	nucleus	30.13	14.33
KRH58978	Soybean	nucleus	29.49	13.75
KRH42875	Soybean	nucleus	28.85	13.33
KRH11026	Soybean	nucleus	28.85	13.29
CDY10767	Canola	nucleus	16.35	11.97
EES01501	Sorghum	nucleus	26.28	11.92
TraesCS3D01G295500.1	Wheat	nucleus	25.32	11.67
Zm00001d043395_P002	Maize	nucleus	24.68	11.32
Os01t0758900-01	Rice	nucleus	24.36	11.14
TraesCS3A01G306400.2	Wheat	nucleus	25.0	11.08
Bra018284.1-P	Field mustard	nucleus	16.35	10.49
TraesCS3B01G330200.2	Wheat	cytosol, nucleus, plastid	23.72	10.38
KRH21261	Soybean	cytosol, mitochondrion, plastid	4.81	3.79

Protein Annotations

EMBL:ACUP02010430	EnsemblPlants:KRH04495	EnsemblPlantsGene:GLYMA_17G165400	EntrezGene:102667651	InterPro:DUF688	PANTHER:PTHR33671
PANTHER:PTHR33671:SF2	PFAM:PF05097	ProteinID:KRH04495	ProteinID:KRH04495.1	UniParc:UPI00029671D0	UniProt:K7MM09
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:15030427..15031365

Molecular Weight (calculated)

34702.3 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.874

Length

312 amino acids

Sequence
(BLAST)

001: MRSFSSTLAS ETDHKGKSDN SLARLPLPPA YKLELNSVPE RNAGNVPFEW EKAPRRPKDE SKLQTQDFEK PPFTSNFLLG RVSKTKQQSL AETRTGSTLS
101: NSQSVASLDK KATKHSKAET REKESSGSND GDEAYEDARD SLSRTESFFM SCSVSGLSGW DEQEVQPFGS FSSDHQKGRN FMIDRFLLAA KAMTSESPQY
201: ASKKAHIGQE QQKQRKKEVN TESPCPINQH RPKALPYYTQ DIDGEESDDC SEYENYTTTT CGLCPRFCLL NPMPGLRMVE RVPTNAAHGM QAKSAASHIG
301: SSKEVLICVS YC

Best Arabidopsis Sequence Match ( AT2G30990.1 )
(BLAST)

001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES

Arabidopsis Description

Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.