Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g055140.2.1 | Tomato | nucleus | 52.72 | 88.07 |
| PGSC0003DMT400039770 | Potato | cytosol | 44.9 | 46.07 |
| KRH22276 | Soybean | nucleus | 12.59 | 44.58 |
| KRH74883 | Soybean | nucleus | 22.11 | 41.94 |
| KRH04495 | Soybean | nucleus | 20.92 | 39.42 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 39.97 | 34.66 |
| KRH27055 | Soybean | nucleus | 32.31 | 33.87 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 27.38 | 30.9 |
| KRH55736 | Soybean | nucleus | 35.37 | 30.28 |
| Bra021686.1-P | Field mustard | nucleus | 26.87 | 29.53 |
| CDY58982 | Canola | nucleus | 26.87 | 29.53 |
| KRH25783 | Soybean | nucleus | 35.37 | 29.42 |
| CDY52694 | Canola | nucleus | 23.47 | 29.36 |
| CDX97772 | Canola | extracellular, vacuole | 27.21 | 28.62 |
| CDY10767 | Canola | nucleus | 20.24 | 27.93 |
| AT2G30990.4 | Thale cress | nucleus | 28.06 | 27.82 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 30.61 | 27.07 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 28.74 | 25.76 |
| Bra018284.1-P | Field mustard | nucleus | 19.9 | 24.07 |
| PGSC0003DMT400026504 | Potato | nucleus | 28.06 | 23.78 |
| Zm00001d043395_P002 | Maize | nucleus | 23.47 | 20.29 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.79 | 19.79 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 23.47 | 19.6 |
| Os01t0758900-01 | Rice | nucleus | 22.28 | 19.21 |
| EES01501 | Sorghum | nucleus | 21.94 | 18.75 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 22.11 | 18.23 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400052652 | EnsemblPlantsGene:PGSC0003DMG400020440 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 |
| PGSC:PGSC0003DMG400020440 | SEG:seg | UniParc:UPI0002960DDD | UniProt:M1BTS2 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400020440]
Coordinates
chr7:+:50274688..50279909
Molecular Weight (calculated)
65627.0 Da
IEP (calculated)
6.974
GRAVY (calculated)
-0.885
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKQLNLDQ PFLSVRRVSP TVTSGSDETM KTEYSLPTVT HPPRYKSELK SGPVRNPGVV PFRWEQSPGK PKYESKRQIR ATEKPPIAPR LPPGRKLKDN
101: QDSDKAHESQ NVSESQIGNA QHSTLKYMNL DEKVKKIESI DCSKDMIQDM EKCDSEDADE VYMDAPNTLS RTESFFVNCS VSGLSGLDEP EAKPSGTSLR
201: DPQARDFMID RFLPAAKAMA SEKSLEMPHY APRKQPAVQE QPRQPKKVVN GDKRPQLRYG PSFALRYSQF HDNYEEESDD DSCYDGNLPT KVCGLLPRFC
301: LKSSFCLMNP VPGMSARTRV PMSPASRTQT GSSSTASCSG SENEQSKSES VAGFVTVHAH EDTNDCFQEL FEYQNIAGEA DLTAPLAEKT LHVDIVHKVE
401: SPIMKSPPKA ERPFNLQDEN QDILKKMAEQ KPSVDSSLSY FPPSSAEKLN NGGEMMALTA SEQAQDHYQD AVASVKPKDD VKRSTRKQTV RKEKLQNSRV
501: AHSKLPAPPP LPKSPSDSWL CRTLPSLSTK NPSSRSYVGT GISPNNQSCK PLSSDPKWET IVKTTKEHQQ HLRYTEEMMT LTPIPEAQ
101: QDSDKAHESQ NVSESQIGNA QHSTLKYMNL DEKVKKIESI DCSKDMIQDM EKCDSEDADE VYMDAPNTLS RTESFFVNCS VSGLSGLDEP EAKPSGTSLR
201: DPQARDFMID RFLPAAKAMA SEKSLEMPHY APRKQPAVQE QPRQPKKVVN GDKRPQLRYG PSFALRYSQF HDNYEEESDD DSCYDGNLPT KVCGLLPRFC
301: LKSSFCLMNP VPGMSARTRV PMSPASRTQT GSSSTASCSG SENEQSKSES VAGFVTVHAH EDTNDCFQEL FEYQNIAGEA DLTAPLAEKT LHVDIVHKVE
401: SPIMKSPPKA ERPFNLQDEN QDILKKMAEQ KPSVDSSLSY FPPSSAEKLN NGGEMMALTA SEQAQDHYQD AVASVKPKDD VKRSTRKQTV RKEKLQNSRV
501: AHSKLPAPPP LPKSPSDSWL CRTLPSLSTK NPSSRSYVGT GISPNNQSCK PLSSDPKWET IVKTTKEHQQ HLRYTEEMMT LTPIPEAQ
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.