Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021686.1-P | Field mustard | nucleus | 53.63 | 59.44 |
| CDY58982 | Canola | nucleus | 53.46 | 59.25 |
| CDX97772 | Canola | extracellular, vacuole | 53.79 | 57.07 |
| CDY52694 | Canola | nucleus | 45.19 | 57.02 |
| CDY10767 | Canola | nucleus | 40.47 | 56.34 |
| Bra018284.1-P | Field mustard | nucleus | 39.29 | 47.94 |
| KRH22276 | Soybean | nucleus | 10.79 | 38.55 |
| KRH74883 | Soybean | nucleus | 18.21 | 34.84 |
| Solyc07g055140.2.1 | Tomato | nucleus | 20.07 | 33.81 |
| KRH04495 | Soybean | nucleus | 17.37 | 33.01 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 33.22 | 29.06 |
| KRH27055 | Soybean | nucleus | 27.49 | 29.06 |
| PGSC0003DMT400039770 | Potato | cytosol | 27.49 | 28.45 |
| PGSC0003DMT400052652 | Potato | nucleus | 27.82 | 28.06 |
| Solyc12g013960.1.1 | Tomato | nucleus | 28.67 | 27.69 |
| KRH55736 | Soybean | nucleus | 31.87 | 27.51 |
| KRH25783 | Soybean | nucleus | 32.55 | 27.3 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 22.09 | 25.14 |
| AT5G45850.1 | Thale cress | nucleus | 17.88 | 23.82 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 24.62 | 21.95 |
| AT4G18630.1 | Thale cress | nucleus | 17.71 | 21.92 |
| AT1G29240.1 | Thale cress | nucleus | 21.25 | 21.84 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 23.61 | 21.34 |
| Os01t0758900-01 | Rice | nucleus | 23.44 | 20.38 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 24.11 | 20.31 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 23.1 | 20.24 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 24.11 | 20.06 |
| AT2G34170.3 | Thale cress | nucleus | 17.37 | 19.69 |
| EES01501 | Sorghum | nucleus | 21.59 | 18.6 |
| Zm00001d043395_P002 | Maize | nucleus | 21.25 | 18.53 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817650 | UniProt:A0A178VME5 | ProteinID:AEC08472.1 | ProteinID:AEC08473.1 | ProteinID:ANM61408.1 |
| ProteinID:ANM61409.1 | ArrayExpress:AT2G30990 | EnsemblPlantsGene:AT2G30990 | RefSeq:AT2G30990 | TAIR:AT2G30990 | RefSeq:AT2G30990-TAIR-G |
| EnsemblPlants:AT2G30990.4 | Unigene:At.66448 | InterPro:DUF688 | UniProt:F4IPV3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 | RefSeq:NP_001031451.1 |
| RefSeq:NP_001323625.1 | RefSeq:NP_001323626.1 | RefSeq:NP_180656.3 | ProteinID:OAP07489.1 | PFAM:PF05097 | PANTHER:PTHR33671 |
| PANTHER:PTHR33671:SF2 | UniParc:UPI00005DC019 | SEG:seg | : | : | : |
Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
Coordinates
chr2:-:13187407..13190458
Molecular Weight (calculated)
66235.9 Da
IEP (calculated)
6.182
GRAVY (calculated)
-0.812
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.