Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58982 | Canola | nucleus | 98.69 | 98.69 |
| AT2G30990.4 | Thale cress | nucleus | 59.44 | 53.63 |
| Bra018284.1-P | Field mustard | nucleus | 42.24 | 46.5 |
| KRH22276 | Soybean | nucleus | 10.28 | 33.13 |
| KRH74883 | Soybean | nucleus | 17.57 | 30.32 |
| Solyc07g055140.2.1 | Tomato | nucleus | 18.88 | 28.69 |
| KRH04495 | Soybean | nucleus | 15.7 | 26.92 |
| Solyc12g013960.1.1 | Tomato | nucleus | 30.84 | 26.87 |
| PGSC0003DMT400052652 | Potato | nucleus | 29.53 | 26.87 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 33.27 | 26.25 |
| PGSC0003DMT400039770 | Potato | cytosol | 28.04 | 26.18 |
| KRH27055 | Soybean | nucleus | 26.73 | 25.49 |
| Bra021994.1-P | Field mustard | nucleus | 19.07 | 24.82 |
| KRH55736 | Soybean | nucleus | 31.59 | 24.6 |
| KRH25783 | Soybean | nucleus | 31.96 | 24.19 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 23.36 | 23.99 |
| Bra012583.1-P | Field mustard | plastid | 19.07 | 22.57 |
| Bra030129.1-P | Field mustard | mitochondrion, nucleus, plastid | 20.19 | 22.22 |
| Bra013335.1-P | Field mustard | nucleus | 19.63 | 22.11 |
| Bra010842.1-P | Field mustard | nucleus | 21.12 | 21.65 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 25.42 | 20.45 |
| Bra005448.1-P | Field mustard | nucleus | 20.0 | 20.3 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 24.86 | 20.27 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.06 | 17.43 |
| Os01t0758900-01 | Rice | nucleus | 21.31 | 16.72 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 21.87 | 16.62 |
| Zm00001d043395_P002 | Maize | nucleus | 21.12 | 16.62 |
| EES01501 | Sorghum | nucleus | 21.12 | 16.42 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 21.87 | 16.41 |
Protein Annotations
Description
AT2G30990 (E=4e-058) | unknown protein
Coordinates
chrA04:-:13854270..13855988
Molecular Weight (calculated)
60043.6 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.806
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMESLMMEE KKQLDFNRPL ISIRRPIQPD SKRRSSDSVT NKIPPSPPVY KSDINSGPVR NPGTVPFQWE HKPGKPKDET KPELQSVVVE QHFVPKLPPG
101: RIVKAREPEE LVRKPETRTN HVEDAKSCSS WYDDDESDDT YLDATDTLSR SESFFFNCSN VSGQGMLVEP FGTLSSDRQT QDLMMGRFLP AAKALTSETP
201: PHLARKPPKP EEPARRIVVV KEKQNKADQN PYRFHHSPVE EEEDGDTNSM MASGVCGLLP QICLRSSFGV LNPVPSVRRQ AQRGVSVRRM RSKYQDPTTT
301: TPCNENHKVK LNGSSTPEGK ERLENLSSAS RTKTSKNFGE LLASDDNTWE PSSEAPVVEK TLYVDTVHSV DKKVQEESLL KDYPSLEVVP VKEDVQNLNG
401: ASEEAISGLK VEECADQAFA EVVEITKEKS DLEVKLQQGN KTDLESSRFH HHHIVAPPPL PKAPSDSWLK RTLPTIPSKN NSFTWLQSLG IDDNNNQITK
501: SIQENLKWET MVKTSNTQQG FVCISKDTLN PIPEA
101: RIVKAREPEE LVRKPETRTN HVEDAKSCSS WYDDDESDDT YLDATDTLSR SESFFFNCSN VSGQGMLVEP FGTLSSDRQT QDLMMGRFLP AAKALTSETP
201: PHLARKPPKP EEPARRIVVV KEKQNKADQN PYRFHHSPVE EEEDGDTNSM MASGVCGLLP QICLRSSFGV LNPVPSVRRQ AQRGVSVRRM RSKYQDPTTT
301: TPCNENHKVK LNGSSTPEGK ERLENLSSAS RTKTSKNFGE LLASDDNTWE PSSEAPVVEK TLYVDTVHSV DKKVQEESLL KDYPSLEVVP VKEDVQNLNG
401: ASEEAISGLK VEECADQAFA EVVEITKEKS DLEVKLQQGN KTDLESSRFH HHHIVAPPPL PKAPSDSWLK RTLPTIPSKN NSFTWLQSLG IDDNNNQITK
501: SIQENLKWET MVKTSNTQQG FVCISKDTLN PIPEA
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.