Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021686.1-P | Field mustard | nucleus | 98.69 | 98.69 |
| CDX97772 | Canola | extracellular, vacuole | 80.56 | 77.1 |
| CDY52694 | Canola | nucleus | 48.6 | 55.32 |
| CDY10767 | Canola | nucleus | 43.18 | 54.23 |
| AT2G30990.4 | Thale cress | nucleus | 59.25 | 53.46 |
| KRH22276 | Soybean | nucleus | 10.28 | 33.13 |
| KRH74883 | Soybean | nucleus | 17.57 | 30.32 |
| Solyc07g055140.2.1 | Tomato | nucleus | 18.88 | 28.69 |
| KRH04495 | Soybean | nucleus | 15.7 | 26.92 |
| PGSC0003DMT400052652 | Potato | nucleus | 29.53 | 26.87 |
| Solyc12g013960.1.1 | Tomato | nucleus | 30.65 | 26.71 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 33.08 | 26.11 |
| PGSC0003DMT400039770 | Potato | cytosol | 27.85 | 26.0 |
| KRH27055 | Soybean | nucleus | 26.54 | 25.31 |
| KRH55736 | Soybean | nucleus | 31.59 | 24.6 |
| KRH25783 | Soybean | nucleus | 31.96 | 24.19 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 23.55 | 24.18 |
| CDY43328 | Canola | nucleus | 22.8 | 23.87 |
| CDY06031 | Canola | nucleus | 18.69 | 22.88 |
| CDY15640 | Canola | mitochondrion, nucleus, plastid | 19.44 | 22.81 |
| CDX90178 | Canola | nucleus | 21.68 | 22.79 |
| CDX94655 | Canola | mitochondrion | 20.37 | 22.43 |
| CDY01559 | Canola | nucleus, plastid | 18.69 | 22.42 |
| CDX78880 | Canola | nucleus | 19.63 | 22.01 |
| CDX87761 | Canola | nucleus | 17.76 | 21.94 |
| CDX99449 | Canola | nucleus | 19.07 | 21.61 |
| CDY53997 | Canola | plastid | 16.82 | 21.38 |
| CDY17227 | Canola | nucleus | 19.07 | 20.82 |
| CDY63140 | Canola | nucleus | 18.88 | 20.65 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 25.61 | 20.6 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 24.86 | 20.27 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.43 | 17.73 |
| Os01t0758900-01 | Rice | nucleus | 21.68 | 17.01 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 22.24 | 16.9 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 22.24 | 16.69 |
| Zm00001d043395_P002 | Maize | nucleus | 21.12 | 16.62 |
| EES01501 | Sorghum | nucleus | 21.12 | 16.42 |
Protein Annotations
| EnsemblPlants:CDY58982 | EnsemblPlantsGene:GSBRNA2T00025424001 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 |
| ProteinID:CDY58982 | ProteinID:CDY58982.1 | SEG:seg | UniParc:UPI0004EDEE26 | UniProt:A0A078J0X4 | MapMan:35.2 |
Description
BnaA04g28680DBnaA04g28680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0X4]
Coordinates
chrLK033716:-:19645..21926
Molecular Weight (calculated)
60010.5 Da
IEP (calculated)
6.524
GRAVY (calculated)
-0.833
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMKSLMMEE KKQLDFNRPL ISIRRPIQPD SKRRSSDSVT NKIPPSPPVY KSDINSGPVR NPGTVPFQWE HKPGKPKDET KPELQSVVVE QHFVPKLPPG
101: RIVKAREPEE LVRKPETRTN HVEDAKSCSS WYDDDESDDT YLDATDTLSR SESFFFNCSN VSGQGMLVEP FGTLSSDRQT QDLMMGRFLP AAKALTSETP
201: PHLARKPPKP EEPARRIVVV KEKQNKADQN PYRFHHSPVE EEEDGDTNSM MASGVCGLLP QICLRSSFGV LNPVPSVRRQ AQRGVSVRRM RSKYQDPTTT
301: TPCNENHKVK LNGSSTPEGK ERLENLSSAS RTKTSKNFGE LLASDDNTWE PSSEAPVVEK TLYVDTVHSV DKKVQEESLL KDYPSQEVVP VKEDVQNLNG
401: ASEEAISDLK GEECADQAVA KVVEITKEKS DLEVKLQQGN KTDLESSRFH HHHIVAPPPL PKAPSDSWLK RTLPTVPSKN NSFTWLQSLG IDDNNNQITK
501: SIQENLKWET MVKTSNTQQG FVCISKDTLN PIPEA
101: RIVKAREPEE LVRKPETRTN HVEDAKSCSS WYDDDESDDT YLDATDTLSR SESFFFNCSN VSGQGMLVEP FGTLSSDRQT QDLMMGRFLP AAKALTSETP
201: PHLARKPPKP EEPARRIVVV KEKQNKADQN PYRFHHSPVE EEEDGDTNSM MASGVCGLLP QICLRSSFGV LNPVPSVRRQ AQRGVSVRRM RSKYQDPTTT
301: TPCNENHKVK LNGSSTPEGK ERLENLSSAS RTKTSKNFGE LLASDDNTWE PSSEAPVVEK TLYVDTVHSV DKKVQEESLL KDYPSQEVVP VKEDVQNLNG
401: ASEEAISDLK GEECADQAVA KVVEITKEKS DLEVKLQQGN KTDLESSRFH HHHIVAPPPL PKAPSDSWLK RTLPTVPSKN NSFTWLQSLG IDDNNNQITK
501: SIQENLKWET MVKTSNTQQG FVCISKDTLN PIPEA
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.