Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- mitochondrion 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012583.1-P | Field mustard | plastid | 98.81 | 92.04 |
| CDY01559 | Canola | nucleus, plastid | 81.71 | 77.13 |
| CDX78880 | Canola | nucleus | 73.16 | 64.57 |
| CDX99449 | Canola | nucleus | 70.55 | 62.92 |
| AT4G18630.1 | Thale cress | nucleus | 70.78 | 62.21 |
| CDY06031 | Canola | nucleus | 29.69 | 28.6 |
| CDX87761 | Canola | nucleus | 27.79 | 27.02 |
| CDX90178 | Canola | nucleus | 24.23 | 20.04 |
| CDY43328 | Canola | nucleus | 23.99 | 19.77 |
| CDY15640 | Canola | mitochondrion, nucleus, plastid | 20.67 | 19.08 |
| CDX94655 | Canola | mitochondrion | 21.85 | 18.93 |
| CDY58982 | Canola | nucleus | 21.38 | 16.82 |
| CDY10767 | Canola | nucleus | 16.86 | 16.67 |
| CDY17227 | Canola | nucleus | 19.24 | 16.53 |
| CDY63140 | Canola | nucleus | 19.0 | 16.36 |
| CDY52694 | Canola | nucleus | 18.05 | 16.17 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 19.48 | 15.74 |
| KRH58978 | Soybean | nucleus | 24.47 | 15.4 |
| KRH11026 | Soybean | nucleus | 24.47 | 15.21 |
| CDX97772 | Canola | extracellular, vacuole | 19.95 | 15.03 |
| KRH42875 | Soybean | nucleus | 23.99 | 14.96 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 23.28 | 14.74 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 22.09 | 14.18 |
| Zm00001d043395_P002 | Maize | nucleus | 22.09 | 13.68 |
| EES01501 | Sorghum | nucleus | 22.33 | 13.66 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 21.38 | 13.29 |
| PGSC0003DMT400026504 | Potato | nucleus | 21.85 | 13.26 |
| Solyc02g076680.2.1 | Tomato | nucleus | 21.85 | 13.24 |
| Os01t0758900-01 | Rice | nucleus | 21.38 | 13.2 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 21.85 | 13.07 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 21.62 | 12.76 |
| VIT_10s0003g01370.t01 | Wine grape | plastid | 22.8 | 12.12 |
| KRH21261 | Soybean | cytosol, mitochondrion, plastid | 8.79 | 9.34 |
Protein Annotations
| EnsemblPlants:CDY53997 | EnsemblPlantsGene:GSBRNA2T00011883001 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF3 | PFAM:PF05097 |
| ProteinID:CDY53997 | ProteinID:CDY53997.1 | SEG:seg | UniParc:UPI0004EDB5DD | UniProt:A0A078IVJ2 | MapMan:35.2 |
Description
BnaA03g58220DBnaA03g58220D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IVJ2]
Coordinates
chrLK033261:+:68454..69716
Molecular Weight (calculated)
47408.7 Da
IEP (calculated)
7.344
GRAVY (calculated)
-0.762
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSKLNLYS PLPSIRRISS KTKHSSESNN KKTIITRPEL RSCLSKEQET SVFVLSDQSF DHLSEPASVP FMWEHTPGKP KDDMATLIQE SGLLETDDEE
101: EEDLYTVSSD GTFSVNCSTS GVSDIEKNGE KSDDASSRES LDQMMSRFLP AAKAMAFTHQ KRSSEQKHFA IVRQRSRVVA EHEHFAIVQS LYDDLNIDDD
201: DDDDDDDEDD EYDVDHRIYP KVTIKKACGF LPRLCAKNSL KISNPVPLVS VSNRGLNHSR EQTGLPNWST RRLSGFMSPY RTSCSAPEKP ESFKRLNIGI
301: SKSQELCPTR TRTREILPNH SHSGEVRMLR NSISTPPRIQ GTTIHDTRFL AEEVIRRRRS SNRSGNLLKT SPKCTAAITT PPLPETPSRP WLRRTLLPPV
401: SPRPYGVVLG QVGAKKLNQE I
101: EEDLYTVSSD GTFSVNCSTS GVSDIEKNGE KSDDASSRES LDQMMSRFLP AAKAMAFTHQ KRSSEQKHFA IVRQRSRVVA EHEHFAIVQS LYDDLNIDDD
201: DDDDDDDEDD EYDVDHRIYP KVTIKKACGF LPRLCAKNSL KISNPVPLVS VSNRGLNHSR EQTGLPNWST RRLSGFMSPY RTSCSAPEKP ESFKRLNIGI
301: SKSQELCPTR TRTREILPNH SHSGEVRMLR NSISTPPRIQ GTTIHDTRFL AEEVIRRRRS SNRSGNLLKT SPKCTAAITT PPLPETPSRP WLRRTLLPPV
401: SPRPYGVVLG QVGAKKLNQE I
001: MEGKKLNLYA PLPSIRRIPS MIERSSELEN KKTTITRPEL RSCPSTKQET PVFVLPDQSF DHLTEPASIP FMWEQIPGKP KDDMATLIQE SGLLETDDEE
101: EDEVDEDLDT VSSNVSFSVN CSTSGVSEIE KTGERSDCDE KSRESLDLMM SRFLPAAKAM ALQTHQKHQS SYNSSEQKLI TQNREALVAR QRSQLVAEHE
201: HFAIVQSLYD DLNIDDDTED DENDDDGDDY GHVDHKIYPA EVTKKACGFL PRLCAKNSFK FLNPVPLDSV SNRSMKHSGD QTSLPNWSTR RLSGFISPYR
301: TSCSDSGFLG TPEKPESFKR LNRGISKSQE LYPTRTRREV LPNYSNSGEI KMFRNSISTP SRIQRTTIHD SRFLVEEVNR RRNNKSGNLQ QTSSEYTPAL
401: SPPPLPETPS RSWLGRTLLP PVNPRPYGVV LGQVGIKKLN QEVLESTKWE TIVKTSYVHN DHARYSQELI VYPSRQQNT
101: EDEVDEDLDT VSSNVSFSVN CSTSGVSEIE KTGERSDCDE KSRESLDLMM SRFLPAAKAM ALQTHQKHQS SYNSSEQKLI TQNREALVAR QRSQLVAEHE
201: HFAIVQSLYD DLNIDDDTED DENDDDGDDY GHVDHKIYPA EVTKKACGFL PRLCAKNSFK FLNPVPLDSV SNRSMKHSGD QTSLPNWSTR RLSGFISPYR
301: TSCSDSGFLG TPEKPESFKR LNRGISKSQE LYPTRTRREV LPNYSNSGEI KMFRNSISTP SRIQRTTIHD SRFLVEEVNR RRNNKSGNLQ QTSSEYTPAL
401: SPPPLPETPS RSWLGRTLLP PVNPRPYGVV LGQVGIKKLN QEVLESTKWE TIVKTSYVHN DHARYSQELI VYPSRQQNT
Arabidopsis Description
Uncharacterized protein At4g18630 [Source:UniProtKB/TrEMBL;Acc:Q8GYP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.