Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17227 | Canola | nucleus | 91.21 | 91.02 |
| AT2G34170.3 | Thale cress | nucleus | 66.46 | 62.14 |
| CDX94655 | Canola | mitochondrion | 46.01 | 46.3 |
| CDY15640 | Canola | mitochondrion, nucleus, plastid | 43.15 | 46.27 |
| CDX90178 | Canola | nucleus | 46.83 | 44.99 |
| CDY43328 | Canola | nucleus | 45.4 | 43.44 |
| KRH21261 | Soybean | cytosol, mitochondrion, plastid | 18.81 | 23.23 |
| CDY06031 | Canola | nucleus | 20.04 | 22.43 |
| CDY01559 | Canola | nucleus, plastid | 20.45 | 22.42 |
| KRH58978 | Soybean | nucleus | 30.06 | 21.97 |
| CDX87761 | Canola | nucleus | 19.43 | 21.94 |
| CDX99449 | Canola | nucleus | 20.86 | 21.61 |
| CDX78880 | Canola | nucleus | 21.06 | 21.59 |
| KRH42875 | Soybean | nucleus | 29.65 | 21.48 |
| KRH11026 | Soybean | nucleus | 29.65 | 21.42 |
| Solyc02g076680.2.1 | Tomato | nucleus | 28.83 | 20.29 |
| PGSC0003DMT400026504 | Potato | nucleus | 28.02 | 19.74 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 20.86 | 19.58 |
| CDY52694 | Canola | nucleus | 18.61 | 19.36 |
| CDX97772 | Canola | extracellular, vacuole | 21.88 | 19.14 |
| CDY53997 | Canola | plastid | 16.36 | 19.0 |
| CDY58982 | Canola | nucleus | 20.65 | 18.88 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 25.56 | 18.8 |
| CDY10767 | Canola | nucleus | 16.36 | 18.78 |
| VIT_10s0003g01370.t01 | Wine grape | plastid | 30.06 | 18.56 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 24.74 | 18.45 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.49 | 16.25 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 23.11 | 16.05 |
| Zm00001d043395_P002 | Maize | nucleus | 21.88 | 15.74 |
| EES01501 | Sorghum | nucleus | 21.68 | 15.41 |
| Os01t0758900-01 | Rice | nucleus | 21.47 | 15.4 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 22.09 | 15.15 |
Protein Annotations
| EnsemblPlants:CDY63140 | EnsemblPlantsGene:GSBRNA2T00037955001 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF3 | PFAM:PF05097 |
| ProteinID:CDY63140 | ProteinID:CDY63140.1 | SEG:seg | UniParc:UPI0004EAF7B3 | UniProt:A0A078JEG6 | MapMan:35.2 |
Description
BnaCnng41430DBnaCnng41430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEG6]
Coordinates
chrLK034250:-:12326..14889
Molecular Weight (calculated)
54493.4 Da
IEP (calculated)
9.499
GRAVY (calculated)
-0.802
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MAESKLNFEA PLLSTREMKK EAVSVRKNMA KKLTHDDSKT SESPSLPVLG LDHVPESASV VFKSSLEKAI EEESEDDDVF SDALDTLSLK QSVSGSIEAT
101: KPPMASQDPD QSRDFMLNRF LPAAKSMTMD QQQPQYAMKR QPSPFMSEPV RQIRDILPAA TPKRYEYNTT PSYYHGLDDD TSDEDEDEAS EYLSRRGCGM
201: SPQLCLGMLS SVHGLKEKPY SLRTSSHDHV KSSKVSQLKS RFQSVKKLAL DKLGSRAQSP VHPSVDTNLR TASVPSSPYR QTGCLSPYRS VGNSSPLHSA
301: GFPGTRKEAE IMRANRLNKH IKNPKKSQDL LYPKSTRLDS STSSVLEKTL HVDTDKTPKT TNVKILPETT SEEPEMAGKK PKAVDSLSIS SGIKKMKADN
401: LDKNNCDRSP LALPTPKKPS ESWLLRNLPS VSSKISSRRY LFHPQKKDLK ENSTSVTKWE TIVKTSCIHR DHIRYSEELV ARSSCQSTT
101: KPPMASQDPD QSRDFMLNRF LPAAKSMTMD QQQPQYAMKR QPSPFMSEPV RQIRDILPAA TPKRYEYNTT PSYYHGLDDD TSDEDEDEAS EYLSRRGCGM
201: SPQLCLGMLS SVHGLKEKPY SLRTSSHDHV KSSKVSQLKS RFQSVKKLAL DKLGSRAQSP VHPSVDTNLR TASVPSSPYR QTGCLSPYRS VGNSSPLHSA
301: GFPGTRKEAE IMRANRLNKH IKNPKKSQDL LYPKSTRLDS STSSVLEKTL HVDTDKTPKT TNVKILPETT SEEPEMAGKK PKAVDSLSIS SGIKKMKADN
401: LDKNNCDRSP LALPTPKKPS ESWLLRNLPS VSSKISSRRY LFHPQKKDLK ENSTSVTKWE TIVKTSCIHR DHIRYSEELV ARSSCQSTT
001: MAEKQLNFDA PLLSTRRMKK SAISVRRNMP KQLTDESKTS ESLSVSVLVQ DMGLDQVPDS PLESKHVEEE AEESEDDDVF SDALDTLSLK QSISGGGGVE
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
Arabidopsis Description
Uncharacterized protein At2g34170 [Source:UniProtKB/TrEMBL;Acc:Q8RYE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.