Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17227 | Canola | nucleus | 63.29 | 67.55 |
| CDY63140 | Canola | nucleus | 62.14 | 66.46 |
| Bra005448.1-P | Field mustard | nucleus | 61.19 | 60.72 |
| AT1G29240.1 | Thale cress | nucleus | 50.67 | 45.93 |
| KRH21261 | Soybean | cytosol, mitochondrion, plastid | 17.59 | 23.23 |
| KRH42875 | Soybean | nucleus | 29.83 | 23.11 |
| AT4G18630.1 | Thale cress | nucleus | 21.03 | 22.96 |
| Solyc02g076680.2.1 | Tomato | nucleus | 30.4 | 22.88 |
| KRH58978 | Soybean | nucleus | 29.06 | 22.72 |
| PGSC0003DMT400026504 | Potato | nucleus | 29.83 | 22.48 |
| AT5G45850.1 | Thale cress | nucleus | 18.93 | 22.25 |
| KRH11026 | Soybean | nucleus | 28.68 | 22.16 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 20.46 | 20.54 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 26.0 | 20.45 |
| VIT_10s0003g01370.t01 | Wine grape | plastid | 30.4 | 20.08 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 25.05 | 19.97 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.56 | 17.43 |
| AT2G30990.4 | Thale cress | nucleus | 19.69 | 17.37 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 22.94 | 17.05 |
| Os01t0758900-01 | Rice | nucleus | 21.41 | 16.42 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 22.37 | 16.41 |
| Zm00001d043395_P002 | Maize | nucleus | 20.65 | 15.88 |
| EES01501 | Sorghum | nucleus | 20.65 | 15.7 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817978 | ProteinID:AAM14830.1 | ProteinID:AEC08927.1 | ProteinID:AEC08928.1 | ProteinID:ANM62904.1 |
| ProteinID:ANM62905.1 | ProteinID:ANM62906.1 | ProteinID:ANM62907.1 | ArrayExpress:AT2G34170 | EnsemblPlantsGene:AT2G34170 | RefSeq:AT2G34170 |
| TAIR:AT2G34170 | RefSeq:AT2G34170-TAIR-G | EnsemblPlants:AT2G34170.3 | InterPro:DUF688 | RefSeq:NP_001318346.1 | RefSeq:NP_001318347.1 |
| RefSeq:NP_001325029.1 | RefSeq:NP_001325030.1 | RefSeq:NP_001325031.1 | RefSeq:NP_180964.1 | PFAM:PF05097 | PANTHER:PTHR33671 |
| PANTHER:PTHR33671:SF3 | UniProt:Q8RYE0 | UniParc:UPI000009EC4D | SEG:seg | : | : |
Description
Uncharacterized protein At2g34170 [Source:UniProtKB/TrEMBL;Acc:Q8RYE0]
Coordinates
chr2:+:14427509..14430327
Molecular Weight (calculated)
58389.6 Da
IEP (calculated)
7.877
GRAVY (calculated)
-0.865
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKQLNFDA PLLSTRRMKK SAISVRRNMP KQLTDESKTS ESLSVSVLVQ DMGLDQVPDS PLESKHVEEE AEESEDDDVF SDALDTLSLK QSISGGGGVE
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.