Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63140 | Canola | nucleus | 91.02 | 91.21 |
| Bra005448.1-P | Field mustard | nucleus | 93.06 | 86.53 |
| AT2G34170.3 | Thale cress | nucleus | 67.55 | 63.29 |
| CDX94655 | Canola | mitochondrion | 45.1 | 45.47 |
| CDY15640 | Canola | mitochondrion, nucleus, plastid | 42.04 | 45.18 |
| CDX90178 | Canola | nucleus | 45.1 | 43.42 |
| CDY43328 | Canola | nucleus | 44.08 | 42.27 |
| KRH21261 | Soybean | cytosol, mitochondrion, plastid | 18.57 | 22.98 |
| CDY01559 | Canola | nucleus, plastid | 20.61 | 22.65 |
| CDX99449 | Canola | nucleus | 20.82 | 21.61 |
| CDX78880 | Canola | nucleus | 21.02 | 21.59 |
| CDY06031 | Canola | nucleus | 19.18 | 21.51 |
| KRH58978 | Soybean | nucleus | 29.18 | 21.38 |
| KRH11026 | Soybean | nucleus | 29.18 | 21.12 |
| CDX87761 | Canola | nucleus | 18.57 | 21.02 |
| KRH42875 | Soybean | nucleus | 28.78 | 20.89 |
| Solyc02g076680.2.1 | Tomato | nucleus | 28.78 | 20.29 |
| PGSC0003DMT400026504 | Potato | nucleus | 28.16 | 19.88 |
| VIT_10s0003g01370.t01 | Wine grape | plastid | 31.63 | 19.57 |
| CDY53997 | Canola | plastid | 16.53 | 19.24 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 20.41 | 19.19 |
| CDY52694 | Canola | nucleus | 18.37 | 19.15 |
| CDY58982 | Canola | nucleus | 20.82 | 19.07 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 25.51 | 18.8 |
| CDX97772 | Canola | extracellular, vacuole | 21.43 | 18.78 |
| CDY10767 | Canola | nucleus | 15.92 | 18.31 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 23.88 | 17.84 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 22.24 | 16.1 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 22.45 | 15.62 |
| Zm00001d043395_P002 | Maize | nucleus | 21.63 | 15.59 |
| EES01501 | Sorghum | nucleus | 21.43 | 15.26 |
| Os01t0758900-01 | Rice | nucleus | 21.02 | 15.1 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 21.84 | 15.01 |
Protein Annotations
| EnsemblPlants:CDY17227 | EnsemblPlantsGene:GSBRNA2T00095300001 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF3 | PFAM:PF05097 |
| ProteinID:CDY17227 | ProteinID:CDY17227.1 | SEG:seg | UniParc:UPI0004EECB84 | UniProt:A0A078FWV6 | MapMan:35.2 |
Description
BnaA05g09610DBnaA05g09610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWV6]
Coordinates
chrLK032071:+:551030..552896
Molecular Weight (calculated)
54625.5 Da
IEP (calculated)
9.665
GRAVY (calculated)
-0.800
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESKLNFEA PLLSTRQMKK EAVSVRKNMA KKLTHDDSKT SESPSVPVLG LDHVPNTASV VFKSSLEKAI EEESEDDDVF SDALDTLSLK QSVSGSIEAT
101: KRPMASEDPD QSRDFMLNRF LPAAKSMTME QQQPQYAMKR QPSPFVSEPV RQIRDILPAA TPKRYEYNTT PSYYHGLDDD TSDEDDEEAS EYLSRRGCGM
201: SPQLCLGMLS SAHGLKEKPY SLRTSSHDQV KSSKVAKLKS RFQSVKKLAL DKLGSRAQSP VHPSVDTNLR TASVPSSPYR QTGCLSPYRS VGNSSPLHSA
301: GFPGTRKEAE IMRANRLNKH IRNPKKSHDL LYPKSTRLDS STSSVMEKTL HVDTDKNPKT SNVKILPETT SEKPKAVLEH QAVESLSISS AIKKMKAGDL
401: DKNKSGCDLS PHDLPTPKKP SESWLLRNLP SVSSKISSRR YLFHPQKKDL KENSTSVTKW ETIVKTSCIH RDHIRYSEEL VARSSCQSTT
101: KRPMASEDPD QSRDFMLNRF LPAAKSMTME QQQPQYAMKR QPSPFVSEPV RQIRDILPAA TPKRYEYNTT PSYYHGLDDD TSDEDDEEAS EYLSRRGCGM
201: SPQLCLGMLS SAHGLKEKPY SLRTSSHDQV KSSKVAKLKS RFQSVKKLAL DKLGSRAQSP VHPSVDTNLR TASVPSSPYR QTGCLSPYRS VGNSSPLHSA
301: GFPGTRKEAE IMRANRLNKH IRNPKKSHDL LYPKSTRLDS STSSVMEKTL HVDTDKNPKT SNVKILPETT SEKPKAVLEH QAVESLSISS AIKKMKAGDL
401: DKNKSGCDLS PHDLPTPKKP SESWLLRNLP SVSSKISSRR YLFHPQKKDL KENSTSVTKW ETIVKTSCIH RDHIRYSEEL VARSSCQSTT
001: MAEKQLNFDA PLLSTRRMKK SAISVRRNMP KQLTDESKTS ESLSVSVLVQ DMGLDQVPDS PLESKHVEEE AEESEDDDVF SDALDTLSLK QSISGGGGVE
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
101: AMKPSMPSED PQFMLDRFLP AAKSLTLEQP PQYSWKRQPL PLMSEPMRQI RDIVPAENRA TPTRYESSFT PSYYQDIDDE ESEEDSDDDE VSEYLSKRGC
201: GMMSPQICFK NSLGMLSSVN GLKEKPYSLR TPSHDQVKSS KVAQLKSRFQ SVKKLALDYK QKLGSIAQSP VHPSVGKKFN FGSEQHESKS SASRPSSPYR
301: QNGCMSPYRS VGNSSPLHAA GFPGTRKEAE VMRANRLNKH IRNISKSHES LYPKSTKQDC STSSAMEKTL YVDSENSPRT SNENRSSNVK KLPETISEEP
401: EMEGKKPKAV RELKAVETLS ISSGVKMMKA DELGKNNSGC DLSPLAPPPP KKPSESWLFS NLPSVSSKIP SPRYLFHPQK KNVEENSTSV TKWETIVKTS
501: YTHRDHIRYS EELVAHSSCQ SKT
Arabidopsis Description
Uncharacterized protein At2g34170 [Source:UniProtKB/TrEMBL;Acc:Q8RYE0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.