CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74883	Soybean	nucleus	74.7	40.0
KRH04495	Soybean	nucleus	62.65	33.33
KRH27055	Soybean	nucleus	78.92	23.35
Solyc07g055140.2.1	Tomato	nucleus	45.18	21.31
KRH25783	Soybean	nucleus	59.04	13.86
KRH55736	Soybean	nucleus	57.23	13.83
PGSC0003DMT400052652	Potato	nucleus	44.58	12.59
CDY52694	Canola	nucleus	32.53	11.49
VIT_12s0028g02110.t01	Wine grape	nucleus	46.39	11.36
AT2G30990.4	Thale cress	nucleus	38.55	10.79
GSMUA_Achr1P04800_001	Banana	nucleus	33.73	10.75
Solyc12g013960.1.1	Tomato	nucleus	39.16	10.59
CDX97772	Canola	extracellular, vacuole	34.94	10.38
CDY58982	Canola	nucleus	33.13	10.28
Bra021686.1-P	Field mustard	nucleus	33.13	10.28
CDY10767	Canola	nucleus	24.7	9.62
GSMUA_Achr6P26820_001	Banana	nucleus	36.75	9.3
Bra018284.1-P	Field mustard	nucleus	24.7	8.44
GSMUA_Achr9P06400_001	Banana	nucleus	33.13	8.27
PGSC0003DMT400039770	Potato	cytosol	28.31	8.2
KRH11026	Soybean	nucleus	31.33	7.68
KRH42875	Soybean	nucleus	30.12	7.41
KRH58978	Soybean	nucleus	29.52	7.32
TraesCS3D01G295500.1	Wheat	nucleus	28.31	6.94
Os01t0758900-01	Rice	nucleus	28.31	6.89
EES01501	Sorghum	nucleus	27.71	6.69
Zm00001d043395_P002	Maize	nucleus	27.11	6.62
TraesCS3B01G330200.2	Wheat	cytosol, nucleus, plastid	27.11	6.31
TraesCS3A01G306400.2	Wheat	nucleus	25.9	6.11
KRH21261	Soybean	cytosol, mitochondrion, plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02008402	EnsemblPlants:KRH22276	EnsemblPlantsGene:GLYMA_13G290300	InterPro:DUF688	PANTHER:PTHR33671	PANTHER:PTHR33671:SF2
PFAM:PF05097	ProteinID:KRH22276	ProteinID:KRH22276.1	UniParc:UPI0006EDC451	UniProt:A0A0R0H8J7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr13:-:39037773..39038287

Molecular Weight (calculated)

18465.8 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.863

Length

166 amino acids

Sequence
(BLAST)

001: MILKDLMEEK QLNLNQPLLS VRRFSSTLAS ETDHKSKTDK PLARLPLPPA YKSELNSVPQ RNAGNVPFVW EKPPGSPKNE SKLQTQAIEQ SPLTSPNFPP
101: GRASQIKQQS LAEMRSGSTL SNSQITKHSK RKTKEMGSSV SDDGDEAYED ARDLLSRTES FFMSCS

Best Arabidopsis Sequence Match ( AT2G30990.1 )
(BLAST)

001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES

Arabidopsis Description

Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.