Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g013960.1.1 | Tomato | nucleus | 83.25 | 77.69 |
| PGSC0003DMT400052652 | Potato | nucleus | 46.07 | 44.9 |
| KRH04495 | Soybean | nucleus | 18.32 | 33.65 |
| KRH74883 | Soybean | nucleus | 17.1 | 31.61 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 34.55 | 29.2 |
| KRH22276 | Soybean | nucleus | 8.2 | 28.31 |
| Bra021686.1-P | Field mustard | nucleus | 26.18 | 28.04 |
| CDY58982 | Canola | nucleus | 26.0 | 27.85 |
| KRH27055 | Soybean | nucleus | 27.23 | 27.81 |
| CDX97772 | Canola | extracellular, vacuole | 27.05 | 27.73 |
| AT2G30990.4 | Thale cress | nucleus | 28.45 | 27.49 |
| CDY52694 | Canola | nucleus | 21.99 | 26.81 |
| CDY10767 | Canola | nucleus | 19.02 | 25.59 |
| KRH55736 | Soybean | nucleus | 30.19 | 25.18 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 22.86 | 25.14 |
| KRH25783 | Soybean | nucleus | 30.54 | 24.75 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 27.75 | 23.91 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 26.0 | 22.71 |
| Bra018284.1-P | Field mustard | nucleus | 18.67 | 22.02 |
| PGSC0003DMT400026504 | Potato | nucleus | 24.61 | 20.32 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 21.47 | 18.17 |
| EES01501 | Sorghum | nucleus | 21.12 | 17.59 |
| Zm00001d043395_P002 | Maize | nucleus | 20.77 | 17.5 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 21.47 | 17.47 |
| Os01t0758900-01 | Rice | nucleus | 20.42 | 17.16 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 21.12 | 16.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039770 | EnsemblPlantsGene:PGSC0003DMG400015369 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 |
| PGSC:PGSC0003DMG400015369 | SEG:seg | UniParc:UPI000294A8EA | UniProt:M1B8R0 | MapMan:35.2 | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015369]
Coordinates
chr12:+:487488..492442
Molecular Weight (calculated)
64620.4 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.960
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHPPHYKSE LNSGLVVMPG TVPFLWEQTP GKPKDESRPQ THFTEKPPTA PKLPPGWKLR DNQDFDQTGK FQNAMLSFTS SSDENVKKME SFDSSKEMMH
101: DKEKIESEDD NEAYLDALDT LSRTGSSFLN CSVSGLSEFD EPNAKQSRTS STNPQTKDFM MGRFLPAAKA MTSDKTSETP YYVRKKQPPV EDQRRQTKNI
201: INGDRQPQLR YGPSFTLYHS QAHDYKEEEE ESDDNCYERG NLSTNICGLL PHFCLKSSFR LLNPVPAMSA RPRIPVSPVS RTQTGSFSTT SFSGTENERS
301: TSDVSEQKSV VGSITTQLHE DKNDIKGRTY SIYANDPYNN MTMLGTNAEE NNPELKCLSD QNNSREVDVL TPCVEKTLYI DIVHKTDSSV KISCSLDKKP
401: SKLQHEDVEI LEQMIKQKPF VDSSLYSSET SLKPYLQRKA DFNPPRSAEK LNNGREMKTQ TSTSQAQDCY QDAMTLAKSD SDGLEKNRKP IPRREKLENS
501: CKVHPEFLAP PPLPKSPSDS WLCRTLPSLS TKNASSRAYI GTGLNPNNQS SKPLPSDSKW ETIVKMTKKQ QHL
101: DKEKIESEDD NEAYLDALDT LSRTGSSFLN CSVSGLSEFD EPNAKQSRTS STNPQTKDFM MGRFLPAAKA MTSDKTSETP YYVRKKQPPV EDQRRQTKNI
201: INGDRQPQLR YGPSFTLYHS QAHDYKEEEE ESDDNCYERG NLSTNICGLL PHFCLKSSFR LLNPVPAMSA RPRIPVSPVS RTQTGSFSTT SFSGTENERS
301: TSDVSEQKSV VGSITTQLHE DKNDIKGRTY SIYANDPYNN MTMLGTNAEE NNPELKCLSD QNNSREVDVL TPCVEKTLYI DIVHKTDSSV KISCSLDKKP
401: SKLQHEDVEI LEQMIKQKPF VDSSLYSSET SLKPYLQRKA DFNPPRSAEK LNNGREMKTQ TSTSQAQDCY QDAMTLAKSD SDGLEKNRKP IPRREKLENS
501: CKVHPEFLAP PPLPKSPSDS WLCRTLPSLS TKNASSRAYI GTGLNPNNQS SKPLPSDSKW ETIVKMTKKQ QHL
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.