Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH74883 | Soybean | nucleus | 50.27 | 90.97 |
KRH04495 | Soybean | nucleus | 45.28 | 81.41 |
KRH22276 | Soybean | nucleus | 23.35 | 78.92 |
Solyc07g055140.2.1 | Tomato | nucleus | 26.38 | 42.05 |
KRH55736 | Soybean | nucleus | 50.8 | 41.48 |
KRH25783 | Soybean | nucleus | 50.98 | 40.45 |
PGSC0003DMT400052652 | Potato | nucleus | 33.87 | 32.31 |
VIT_12s0028g02110.t01 | Wine grape | nucleus | 37.79 | 31.27 |
Solyc12g013960.1.1 | Tomato | nucleus | 30.84 | 28.18 |
CDY52694 | Canola | nucleus | 23.17 | 27.66 |
AT2G30990.4 | Thale cress | nucleus | 29.06 | 27.49 |
PGSC0003DMT400039770 | Potato | cytosol | 27.81 | 27.23 |
Bra021686.1-P | Field mustard | nucleus | 25.49 | 26.73 |
CDY58982 | Canola | nucleus | 25.31 | 26.54 |
CDY10767 | Canola | nucleus | 19.79 | 26.06 |
CDX97772 | Canola | extracellular, vacuole | 25.31 | 25.4 |
GSMUA_Achr1P04800_001 | Banana | nucleus | 23.53 | 25.34 |
GSMUA_Achr9P06400_001 | Banana | nucleus | 28.52 | 24.06 |
Bra018284.1-P | Field mustard | nucleus | 19.61 | 22.63 |
KRH58978 | Soybean | nucleus | 26.74 | 22.42 |
GSMUA_Achr6P26820_001 | Banana | nucleus | 26.02 | 22.26 |
KRH42875 | Soybean | nucleus | 26.2 | 21.78 |
KRH11026 | Soybean | nucleus | 25.49 | 21.12 |
Os01t0758900-01 | Rice | nucleus | 21.75 | 17.89 |
EES01501 | Sorghum | nucleus | 21.75 | 17.73 |
Zm00001d043395_P002 | Maize | nucleus | 21.39 | 17.65 |
TraesCS3D01G295500.1 | Wheat | nucleus | 21.03 | 17.43 |
TraesCS3A01G306400.2 | Wheat | nucleus | 20.68 | 16.48 |
TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 19.79 | 15.57 |
KRH21261 | Soybean | cytosol, mitochondrion, plastid | 9.8 | 13.89 |
Protein Annotations
EMBL:ACUP02007762 | EnsemblPlants:KRH27055 | EnsemblPlantsGene:GLYMA_12G211300 | EntrezGene:102668249 | GO:GO:0005575 | GO:GO:0016020 |
GO:GO:0016021 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 | ProteinID:KRH27055 |
ProteinID:KRH27055.1 | SEG:seg | UniParc:UPI000294CD00 | UniProt:K7LW72 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr12:+:37025830..37028816
Molecular Weight (calculated)
62599.2 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.892
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMREANSMM LKDLMEEKQL NLNQPLLSVR RFSSTLASET DHKSKSQNSL ARLPLPPAYK SELNSVPERN AGNVPFVWEK APGRPKDESK LQTQDFEKPP
101: FTSNFPPGRV SKTKQQSLAE MRTGSTLSNS QSVASLDKKA TKNSKGETRE KESSGSDDGD EAYEDARDSL SRTESFFMSC SVSGLSGWDE QEVQPFGSFS
201: SDHQQGRNFM IDRFLLAAKA MTSETPQYAS KKAHIGQEQQ KQKKKEVNTE SPCPINQHRP KALPHYTQDI DGEESDDCSE YENYTTTTCG LFPRFCLLNP
301: MPGLRMVDRV PRNAAHGMQA KSAASHIGSS KEQGRTPYGK KLRDSQSGFT EEKEILDILV KSKHGIDPYQ RGCTQHDSSY ESHVHEKTLY VDSVHKVKSQ
401: TNNIGGDFET SIRDSGIYNN SSIDSSPKVI KSKKINSESQ VYGRDKNSDI LTQNSELDLK RQLAAKWVDE ECTLASSKVR YNGKIDLESQ CLTKLGHQEI
501: SGASCFGLPL ALPALKAPSE SWLKRTLPTI CKRNMTSQSN LTANTKTPKT TPLHPKWETN C
101: FTSNFPPGRV SKTKQQSLAE MRTGSTLSNS QSVASLDKKA TKNSKGETRE KESSGSDDGD EAYEDARDSL SRTESFFMSC SVSGLSGWDE QEVQPFGSFS
201: SDHQQGRNFM IDRFLLAAKA MTSETPQYAS KKAHIGQEQQ KQKKKEVNTE SPCPINQHRP KALPHYTQDI DGEESDDCSE YENYTTTTCG LFPRFCLLNP
301: MPGLRMVDRV PRNAAHGMQA KSAASHIGSS KEQGRTPYGK KLRDSQSGFT EEKEILDILV KSKHGIDPYQ RGCTQHDSSY ESHVHEKTLY VDSVHKVKSQ
401: TNNIGGDFET SIRDSGIYNN SSIDSSPKVI KSKKINSESQ VYGRDKNSDI LTQNSELDLK RQLAAKWVDE ECTLASSKVR YNGKIDLESQ CLTKLGHQEI
501: SGASCFGLPL ALPALKAPSE SWLKRTLPTI CKRNMTSQSN LTANTKTPKT TPLHPKWETN C
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.