Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039770 | Potato | cytosol | 77.69 | 83.25 |
| Solyc07g055140.2.1 | Tomato | nucleus | 28.99 | 50.57 |
| KRH22276 | Soybean | nucleus | 10.59 | 39.16 |
| KRH74883 | Soybean | nucleus | 19.38 | 38.39 |
| KRH04495 | Soybean | nucleus | 18.08 | 35.58 |
| VIT_12s0028g02110.t01 | Wine grape | nucleus | 34.53 | 31.27 |
| Bra021686.1-P | Field mustard | nucleus | 26.87 | 30.84 |
| KRH27055 | Soybean | nucleus | 28.18 | 30.84 |
| CDY58982 | Canola | nucleus | 26.71 | 30.65 |
| CDY52694 | Canola | nucleus | 23.29 | 30.43 |
| CDY10767 | Canola | nucleus | 20.36 | 29.34 |
| CDX97772 | Canola | extracellular, vacuole | 26.71 | 29.34 |
| AT2G30990.4 | Thale cress | nucleus | 27.69 | 28.67 |
| KRH55736 | Soybean | nucleus | 31.92 | 28.53 |
| KRH25783 | Soybean | nucleus | 31.92 | 27.72 |
| GSMUA_Achr1P04800_001 | Banana | nucleus | 23.29 | 27.45 |
| Bra018284.1-P | Field mustard | nucleus | 20.03 | 25.31 |
| GSMUA_Achr9P06400_001 | Banana | nucleus | 26.38 | 24.36 |
| GSMUA_Achr6P26820_001 | Banana | nucleus | 25.57 | 23.93 |
| Solyc02g076680.2.1 | Tomato | nucleus | 24.43 | 21.58 |
| Zm00001d043395_P002 | Maize | nucleus | 20.85 | 18.82 |
| TraesCS3D01G295500.1 | Wheat | nucleus | 20.68 | 18.76 |
| EES01501 | Sorghum | nucleus | 20.85 | 18.6 |
| TraesCS3A01G306400.2 | Wheat | nucleus | 20.52 | 17.9 |
| Os01t0758900-01 | Rice | nucleus | 19.87 | 17.89 |
| TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 19.87 | 17.11 |
Protein Annotations
| EnsemblPlants:Solyc12g013960.1.1 | EnsemblPlantsGene:Solyc12g013960.1 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 |
| SEG:seg | UniParc:UPI000276A4CA | UniProt:K4DCT1 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr12:-:4785891..4788385
Molecular Weight (calculated)
69326.2 Da
IEP (calculated)
8.876
GRAVY (calculated)
-0.963
Length
614 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKQLKFNQ PLLSVRRISP AMISQRDEKK KFDNSFPTMT HPPHYKSELN SGLVVKPGAV PFLWEQTPGR PKDESRPQTH FTEKPLTAPK LPPGRKLRDN
101: QDYNQTGKYQ TAMLSCTSSD ENVKKIESFD SSKEVMHDKE KIKSENDDET YLDALDALSR TESSFLNCSV SGLSEFDEPN AKQSRTSSAN PQTKDFMMGR
201: FLPAAKAMTS DKTSETPYYV RKKQTPIVDQ RRQTNNIRNG DRQPQLRYGP SFTLYHSQAH DYKEEEEESD DGCYESGNLS TNICGLLPHF CLRSSFRLLN
301: PVPAMSARPR IPVSPVSRTQ TGSFSTTSFR GTENERSTSD VSEQKSVVGS ITTQLHEDKN DVKGRTYSTY ANDPYNNMTM LSTNAKENNP ELKCLSDQNN
401: IREVDVLTPF VEKTLYIDIV HKTDSSVKIS CSLDKKPSKL QHKDVEILEQ MIKQKPFLDS SLYSSETSLK PYVQRKADCN PPRSAERLNN ERETKAWTST
501: GQARDCYQDT TTLAKSDSDG VEKNRKPIPR REKLEDSCKV HPEFLAPPPL PKSPSDSWLC RTLPSLSTKN ASSRAYIGTG LNPNNQSSKP LPSDSKWGTI
601: VKMTKKQQHL NSGL
101: QDYNQTGKYQ TAMLSCTSSD ENVKKIESFD SSKEVMHDKE KIKSENDDET YLDALDALSR TESSFLNCSV SGLSEFDEPN AKQSRTSSAN PQTKDFMMGR
201: FLPAAKAMTS DKTSETPYYV RKKQTPIVDQ RRQTNNIRNG DRQPQLRYGP SFTLYHSQAH DYKEEEEESD DGCYESGNLS TNICGLLPHF CLRSSFRLLN
301: PVPAMSARPR IPVSPVSRTQ TGSFSTTSFR GTENERSTSD VSEQKSVVGS ITTQLHEDKN DVKGRTYSTY ANDPYNNMTM LSTNAKENNP ELKCLSDQNN
401: IREVDVLTPF VEKTLYIDIV HKTDSSVKIS CSLDKKPSKL QHKDVEILEQ MIKQKPFLDS SLYSSETSLK PYVQRKADCN PPRSAERLNN ERETKAWTST
501: GQARDCYQDT TTLAKSDSDG VEKNRKPIPR REKLEDSCKV HPEFLAPPPL PKSPSDSWLC RTLPSLSTKN ASSRAYIGTG LNPNNQSSKP LPSDSKWGTI
601: VKMTKKQQHL NSGL
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.