Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400052652 | Potato | nucleus | 88.07 | 52.72 |
KRH22276 | Soybean | nucleus | 21.31 | 45.18 |
KRH74883 | Soybean | nucleus | 37.5 | 42.58 |
KRH04495 | Soybean | nucleus | 34.38 | 38.78 |
Solyc12g013960.1.1 | Tomato | nucleus | 50.57 | 28.99 |
KRH27055 | Soybean | nucleus | 42.05 | 26.38 |
VIT_12s0028g02110.t01 | Wine grape | nucleus | 45.74 | 23.75 |
GSMUA_Achr1P04800_001 | Banana | nucleus | 34.38 | 23.22 |
KRH55736 | Soybean | nucleus | 44.6 | 22.85 |
KRH25783 | Soybean | nucleus | 43.18 | 21.5 |
GSMUA_Achr9P06400_001 | Banana | nucleus | 38.35 | 20.3 |
AT2G30990.4 | Thale cress | nucleus | 33.81 | 20.07 |
CDY52694 | Canola | nucleus | 25.85 | 19.36 |
CDY58982 | Canola | nucleus | 28.69 | 18.88 |
Bra021686.1-P | Field mustard | nucleus | 28.69 | 18.88 |
GSMUA_Achr6P26820_001 | Banana | nucleus | 34.66 | 18.6 |
CDX97772 | Canola | extracellular, vacuole | 29.26 | 18.43 |
CDY10767 | Canola | nucleus | 20.17 | 16.67 |
Os01t0758900-01 | Rice | nucleus | 30.4 | 15.69 |
TraesCS3D01G295500.1 | Wheat | nucleus | 29.55 | 15.36 |
TraesCS3A01G306400.2 | Wheat | nucleus | 30.4 | 15.2 |
Zm00001d043395_P002 | Maize | nucleus | 28.69 | 14.85 |
Solyc02g076680.2.1 | Tomato | nucleus | 29.26 | 14.82 |
EES01501 | Sorghum | nucleus | 28.69 | 14.68 |
Bra018284.1-P | Field mustard | nucleus | 20.17 | 14.61 |
TraesCS3B01G330200.2 | Wheat | cytosol, nucleus, plastid | 28.69 | 14.17 |
Protein Annotations
EnsemblPlants:Solyc07g055140.2.1 | EnsemblPlantsGene:Solyc07g055140.2 | InterPro:DUF688 | PANTHER:PTHR33671 | PANTHER:PTHR33671:SF2 | PFAM:PF05097 |
SEG:seg | UniParc:UPI000276C81E | UniProt:K4CG53 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7:+:63275118..63276799
Molecular Weight (calculated)
39196.0 Da
IEP (calculated)
6.882
GRAVY (calculated)
-0.827
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDKQLNLDQ PFLSVRRASP TVASGSDETK KTEYSLPSVT HPPRYKSELK SGPVRNPGVV PFRWEQSPGK PKYESKRQIR ATEKPPIAPR LPPGRKLKDI
101: QDSDKAHESQ NVSESQTGNA QHFTPSCMNL DEKVKKIESI DCSKDMIQDM EKCDSEDADE VYLDASNTLS RTESFFVNCS VSGLSGLDEP EAKLSGTSLR
201: DPQARDFMID RFLPAAKAMA SEKSLETPQY APRKQPAVQE QPRQLKKVLN GDKRPQLRYG PSFALRYSQF HDNYEEESDD DSCYDGNLPT KVCGLLPRFC
301: LKSSFCLMNP IPGMSARTRV PMSPASRTQT GSSSTASCSG SENEPLMLSV QI
101: QDSDKAHESQ NVSESQTGNA QHFTPSCMNL DEKVKKIESI DCSKDMIQDM EKCDSEDADE VYLDASNTLS RTESFFVNCS VSGLSGLDEP EAKLSGTSLR
201: DPQARDFMID RFLPAAKAMA SEKSLETPQY APRKQPAVQE QPRQLKKVLN GDKRPQLRYG PSFALRYSQF HDNYEEESDD DSCYDGNLPT KVCGLLPRFC
301: LKSSFCLMNP IPGMSARTRV PMSPASRTQT GSSSTASCSG SENEPLMLSV QI
001: MLMGSLMMEE KQLDFNRPLI SIRRPTQTSE SESKTRSFDS VTNMIPPSPP VYKSDIKSGP VRNPGTVPFQ WEHKPGKPKD ERKPVLQSFV EPHFVPKLPP
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
101: GRERVVELGR KPESTGADHQ TKTVSSSDKY LVEDAKSNSS RYDDDDDDSD GTYLDATDTL SRTESFFFNC SAVSGASGLD GSGILVEPFG TLSTDRQTQD
201: LMMGRFLPAA KALTSESPPH LARKPPKPEE PVKQLMKKKQ NKVEQNPYRF RHSPDQEEED GNISSMMASG VCGLLPQLCL RSSLGLLNPV PSVRMQQQRA
301: VSVRRMRSKY QDSAPSNETH NKQNEDKRKL KLIESVAKGS SQGESLSVSS IPQGKEKLEN VGTASRSKIS KNFGELLASD ENTWEPSSET PVAEKTLYVD
401: IVHLVDKKVQ EESKKQPILK ESPSLDIVPV KDEEADISQP KSIEQENGNR DEDFTKFSSQ KVEECPDHQA IVALPESDVV EITKEKKIDL EVQLQVITTN
501: IESSRLHHRS SYLIVPPPPL PKAPSDSWLK RTLPTIPPKN NSFAWLQSLG TDDDNHFTKT QANPKWETMV KTSNTQQGFV CFSKETLNPI PES
Arabidopsis Description
Protein of unknown function (DUF688) [Source:TAIR;Acc:AT2G30990]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.