Factsheet for Bra021994.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87761	Canola	nucleus	88.32	83.83
AT5G45850.1	Thale cress	nucleus	59.61	55.06
Bra012583.1-P	Field mustard	plastid	34.06	30.97
Bra013335.1-P	Field mustard	nucleus	34.55	29.89
Bra010842.1-P	Field mustard	nucleus	27.49	21.65
Bra030129.1-P	Field mustard	mitochondrion, nucleus, plastid	25.55	21.6
Bra018284.1-P	Field mustard	nucleus	23.36	19.75
Bra021686.1-P	Field mustard	nucleus	24.82	19.07
Bra005448.1-P	Field mustard	nucleus	22.87	17.84
KRH11026	Soybean	nucleus	27.74	16.84
GSMUA_Achr6P26820_001	Banana	nucleus	26.52	16.62
GSMUA_Achr1P04800_001	Banana	nucleus	20.92	16.51
GSMUA_Achr9P06400_001	Banana	nucleus	25.79	15.94
KRH42875	Soybean	nucleus	26.03	15.85
PGSC0003DMT400026504	Potato	nucleus	26.76	15.85
KRH58978	Soybean	nucleus	25.79	15.84
Solyc02g076680.2.1	Tomato	nucleus	26.76	15.83
VIT_10s0003g01370.t01	Wine grape	plastid	29.44	15.28
TraesCS3D01G295500.1	Wheat	nucleus	24.57	14.92
Os01t0758900-01	Rice	nucleus	24.33	14.66
TraesCS3A01G306400.2	Wheat	nucleus	24.57	14.35
Zm00001d043395_P002	Maize	nucleus	23.36	14.12
TraesCS3B01G330200.2	Wheat	cytosol, nucleus, plastid	24.33	14.03
EES01501	Sorghum	nucleus	23.36	13.95
KRH21261	Soybean	cytosol, mitochondrion, plastid	12.65	13.13

Protein Annotations

EnsemblPlants:Bra021994.1	EnsemblPlants:Bra021994.1-P	EnsemblPlantsGene:Bra021994	InterPro:DUF688	PANTHER:PTHR33671	PANTHER:PTHR33671:SF3
PFAM:PF05097	SEG:seg	UniParc:UPI0002545B68	UniProt:M4DZP7	MapMan:35.2	:

Description

AT5G45850 (E=2e-128) | unknown protein

Coordinates

chrA02:-:18275892..18277127

Molecular Weight (calculated)

46411.6 Da

IEP (calculated)

10.506

GRAVY (calculated)

-0.750

Length

411 amino acids

Sequence
(BLAST)

001: MEEKKPNLDA PSLSVRRIPT KLENPSDSEN TKKITTTIRR RKVKDSCQET EHGTVVRLLQ DDKSFDHVVE PSLVPFVWEQ TPGKPKDHHT LLQESDLIKA
101: LDMVSSTASF SVNCSTNGVS DEFENNGGRP SSVSKDDVNL EYRDLIMARF LPAAKAIALK QKKGSYRDQE EKMMKKKKKK RIIALQRVSM AINQDLNNDG
201: HDHVEEAVHS SDPKKAMFGF LPQLCSKNSL DVLNPVLFRI KTCQNVAVSS SKIINPKTQY SVYKTKPASS TIIVRSNKAM SKSQETSPIP RFSEKLSTTS
301: RLQRTSSTQI KRQDTRFLSE GVKRMRNRNK NRSGNISVSQ PPLPKTPSES WLCRTLPRSS TVSTVVPGQL PVLLSGQDTG LRKMMDQKSI KWETIVKTSY
401: KHHDNVRYSE V

Best Arabidopsis Sequence Match ( AT5G45850.1 )
(BLAST)

001: MEEKKLNLDA PFLSVRRVPT KPDDPNESEN TKKKTMTTRR REIKDSCQET ENEILIRLLQ DQSFEHVMEP SSVPFKWEQT PGKPKDKKNL VEESDLIKAM
101: EMVSSTASFS VNCSSSGVSE FENNGDGDRS SNVSRDDVIL EYRDLIMSRF LPAAEAISLK MKKEASRVKA EKKKKQSIAL QRVSMAINQD LNNDVDDEEH
201: CDHNHVDGID ALVYSNDSKK GQLGFLPWFC SKNSVDVLTP VLSRIKTCQD VGVKSENIIN PKSIDSVYKT KSTSPRIFKS SKVMSKSQEI DATPRFSNDI
301: SRISLPKSRE TLQIPRNHSR LQQTTDQNQR QEIRFLVEEV KRRSNRNKNR SENLSVSQPP LPKTPSESWL CRTLPRSSTT SSVVSGQFAV VVSGQAARFK
401: KNMEKKTDSQ SKKWETIVKT SYSHHDHVRY SEGLIVVHPT RQHKF

Arabidopsis Description

Protein of unknown function (DUF688) [Source:TAIR;Acc:AT5G45850]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.