CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	EES01631	AT2G41090.1	17360592
AT1G14370.1	EES09201	AT2G41090.1	17360592
AT1G14370.1	EES16322	AT2G41090.1	17360592
AT1G14370.1	OQU78227	AT2G41090.1	17360592
AT1G14370.1	EES01631	AT5G21274.1	17360592
AT1G14370.1	EES09201	AT5G21274.1	17360592
AT1G14370.1	EES16322	AT5G21274.1	17360592
AT1G14370.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033004_P004	Maize	plastid	92.84	92.2
Os10t0405100-02	Rice	plasma membrane	83.14	84.11
EER92783	Sorghum	plastid	77.14	76.08
VIT_01s0026g01880.t01	Wine grape	cytosol	67.21	69.29
GSMUA_Achr1P21600_001	Banana	plastid	65.13	68.28
GSMUA_Achr2P07470_001	Banana	plastid	65.36	68.03
KRH45870	Soybean	plastid	62.82	67.66
Solyc01g010660.2.1	Tomato	plastid	64.2	66.35
KRH69316	Soybean	cytosol, plastid	62.82	66.18
KRH74810	Soybean	cytosol, plastid	62.82	66.18
PGSC0003DMT400002280	Potato	plastid	63.74	65.87
AT2G02800.1	Thale cress	plastid	64.2	65.26
KRG99134	Soybean	plastid	62.59	65.14
Solyc05g007140.2.1	Tomato	plastid	63.05	65.0
PGSC0003DMT400065801	Potato	plastid	62.82	64.76
Bra019654.1-P	Field mustard	cytosol, plastid	62.59	64.52
CDY45196	Canola	plastid	63.51	64.4
AT1G69790.1	Thale cress	plastid	57.27	64.08
CDY49086	Canola	cytosol, plastid	62.12	64.05
CDY39318	Canola	cytosol, plastid	62.12	63.9
Bra016265.1-P	Field mustard	plastid	57.74	63.45
CDY38760	Canola	plastid	57.74	63.45
CDY11655	Canola	plastid	57.74	63.45
AT1G26970.1	Thale cress	plastid	60.28	63.35
CDY52768	Canola	plastid	57.97	63.07
CDY67404	Canola	plastid	64.67	62.92
CDY41675	Canola	plastid	64.43	62.84
CDY53554	Canola	plastid	61.89	62.47
CDX81634	Canola	plastid	61.66	62.24
CDY03036	Canola	plastid	63.51	62.22
AT1G14370.1	Thale cress	plastid	60.97	61.97
Bra026834.1-P	Field mustard	plastid	61.43	61.86
CDY46426	Canola	plastid	57.97	61.22
GSMUA_Achr6P10640_001	Banana	plastid	57.04	61.14
Bra016301.1-P	Field mustard	plastid	57.74	60.98
KRH56930	Soybean	cytosol	56.12	60.75
Bra026580.1-P	Field mustard	plastid	64.67	57.38
EER92482	Sorghum	plastid	50.35	57.37
EES18885	Sorghum	plastid	51.96	55.56
Solyc12g077390.1.1	Tomato	cytosol	52.66	54.42
EER93184	Sorghum	plastid	50.12	51.91
EER99941	Sorghum	plastid	48.73	51.59
KXG19409	Sorghum	mitochondrion	48.04	50.73
GSMUA_Achr10P...	Banana	cytosol	64.43	49.03
EER90433	Sorghum	plastid	47.34	48.93
EER95575	Sorghum	cytosol	42.26	46.92
EES04370	Sorghum	plastid	46.42	46.1
PGSC0003DMT400049853	Potato	plasma membrane	50.12	45.02
KXG26902	Sorghum	cytosol	47.81	44.9
EER96629	Sorghum	cytosol	50.81	43.91
EES05745	Sorghum	cytosol	46.65	42.71
EES03187	Sorghum	cytosol	48.27	42.48
OQU78536	Sorghum	plasma membrane	45.5	32.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8064935	UniProt:C5WM81	EnsemblPlants:EER94269
ProteinID:EER94269	ProteinID:EER94269.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF286	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G253700	SUPFAM:SSF56112	unigene:Sbi.13124
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83343	RefSeq:XP_002467271.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:27877164..27882119

Molecular Weight (calculated)

46984.0 Da

IEP (calculated)

10.094

GRAVY (calculated)

-0.461

Length

433 amino acids

Sequence
(BLAST)

001: MGNCMDKAVP VDHNTSYQSK VGSKSISSSN PSTVKSGSTR STWTVASYKD SRELPTPRTE GEILSSSNLK AFSFGDLKSA SKNFRSDSLI GEGGFGYVFK
101: GWIDEQTLAP SKPGSGMVVA IKKLKPEGFQ GHKEWLTEVD YLGQLHHQNL VKLIGYCSDG DNRLLVYEYM PKGSLENHLF RRGADPLPWG IRLKVAIGAA
201: KGLSFLHDAE NQVIYRDFKA SNILLDTEFN AKLSDFGLAK AGPTGDRTHV STQVMGTRGY AAPEYVATGR LSVKADVYSF GVVLLELLTG RRALDKSKPV
301: SEQNLVEWAK PYLGDKRRLY RIMDSKLGGQ YPKKGAHAVA GIALQCIRND GKNRPAMSEV VEKLEQLQDP KYNIAAPQVN TRQMSSSSSG SVPRSPMKAQ
401: PSPRRLSGSA SPKPAAAAAG SPLPGSCRTA QVH

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.