CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	KRG89812	AT2G41090.1	17360592
AT1G14370.1	KRG94975	AT2G41090.1	17360592
AT1G14370.1	KRH18664	AT2G41090.1	17360592
AT1G14370.1	KRG89812	AT5G21274.1	17360592
AT1G14370.1	KRG94975	AT5G21274.1	17360592
AT1G14370.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69316	Soybean	cytosol, plastid	99.51	99.51
KRH45870	Soybean	plastid	83.7	85.57
VIT_01s0026g01880.t01	Wine grape	cytosol	84.18	82.38
KRG99134	Soybean	plastid	82.73	81.73
Solyc01g010660.2.1	Tomato	plastid	78.35	76.85
PGSC0003DMT400002280	Potato	plastid	77.86	76.37
PGSC0003DMT400065801	Potato	plastid	77.86	76.19
Solyc05g007140.2.1	Tomato	plastid	77.13	75.48
AT2G02800.1	Thale cress	plastid	78.1	75.35
Bra019654.1-P	Field mustard	cytosol, plastid	74.94	73.33
CDY49086	Canola	cytosol, plastid	74.45	72.86
CDY45196	Canola	plastid	75.67	72.83
CDY39318	Canola	cytosol, plastid	74.21	72.45
CDY67404	Canola	plastid	77.62	71.69
CDY41675	Canola	plastid	77.37	71.62
AT1G14370.1	Thale cress	plastid	74.21	71.6
CDY53554	Canola	plastid	74.7	71.56
CDX81634	Canola	plastid	74.45	71.33
Bra026834.1-P	Field mustard	plastid	74.21	70.93
CDY03036	Canola	plastid	75.91	70.59
GSMUA_Achr1P21600_001	Banana	plastid	67.64	67.31
HORVU4Hr1G075150.2	Barley	plastid	67.88	66.91
TraesCS4D01G286100.1	Wheat	plastid	68.37	66.75
TraesCS4A01G016800.1	Wheat	plastid	68.37	66.75
TraesCS4B01G287300.1	Wheat	plastid	68.37	66.75
Os10t0405100-02	Rice	plasma membrane	68.86	66.12
Bra026580.1-P	Field mustard	plastid	77.62	65.37
EER92783	Sorghum	plastid	69.34	64.92
KRH56930	Soybean	cytosol	62.29	64.0
GSMUA_Achr2P07470_001	Banana	plastid	63.99	63.22
Zm00001d033004_P004	Maize	plastid	66.67	62.84
EER94269	Sorghum	plastid	66.18	62.82
Zm00001d048314_P001	Maize	cytosol, plastid	68.86	62.06
GSMUA_Achr6P10640_001	Banana	plastid	60.58	61.63
KRH18652	Soybean	plastid	54.99	59.16
KRH07892	Soybean	cytosol	37.23	58.62
KRH73031	Soybean	plastid	55.47	58.16
KRH49102	Soybean	plastid	57.91	58.05
KRG99951	Soybean	plastid	57.91	58.05
KRG97912	Soybean	cytosol	54.01	57.51
KRH15105	Soybean	cytosol, nucleus	53.28	57.48
KRH23073	Soybean	cytosol, plastid	58.39	57.28
KRH65832	Soybean	plastid	57.18	56.76
KRH75643	Soybean	plastid	56.93	56.66
KRH14658	Soybean	plastid	53.28	56.3
KRH10259	Soybean	plastid	57.66	54.99
KRH28911	Soybean	plastid	48.91	54.92
KRH29797	Soybean	plastid	53.04	52.91
KRG89785	Soybean	plasma membrane, vacuole	54.26	52.47
KRH39445	Soybean	plastid	50.61	52.39
KRH60921	Soybean	cytosol	45.99	51.08
GSMUA_Achr10P...	Banana	cytosol	70.07	50.62
KRH51603	Soybean	mitochondrion, plastid	45.26	50.41
KRH14015	Soybean	plastid	50.37	50.24
KRH74099	Soybean	plastid	49.88	49.76
KRH28912	Soybean	plastid	47.93	48.64
KRH20145	Soybean	cytosol	51.58	48.51
KRH03664	Soybean	cytosol	51.58	48.18
KRH24792	Soybean	cytosol, plastid	53.77	47.73
KRH40135	Soybean	cytosol	54.99	47.68
KRH01126	Soybean	cytosol	54.99	47.68
KRG99168	Soybean	nucleus	55.47	46.82
KRH45845	Soybean	nucleus	54.99	46.41
KRG93494	Soybean	cytosol	54.26	45.79
KRH07902	Soybean	plastid	43.07	45.74
KRH74775	Soybean	cytosol	54.26	45.42
KRH07906	Soybean	plastid	45.74	45.08
KRH69360	Soybean	cytosol	54.99	44.49
KRH15106	Soybean	cytosol	1.7	41.18
KRH07896	Soybean	plastid	44.53	37.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100809778	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02000073	EnsemblPlantsGene:GLYMA_01G044100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	UniProt:I1J5M4	InterPro:IPR000719	ProteinID:KRH74809.1	EnsemblPlants:KRH74810
ProteinID:KRH74810	ProteinID:KRH74810.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023BB590	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:4844360..4848706

Molecular Weight (calculated)

45124.8 Da

IEP (calculated)

10.160

GRAVY (calculated)

-0.446

Length

411 amino acids

Sequence
(BLAST)

001: MGNCLDSSAK VDAAQSSKST SASGISKTTP SSLSIPSYSE KSNASSLPTP RSEGEILSSP NLKPFTFNEL KNATRNFRPD SLLGEGGFGY VYKGWIDEHT
101: FTASKPGSGM VVAVKRLKPE GFQGHKEWLT EVNYLGQLYH PNLVKLIGYC LEGENRLLVY EFMPKGSLEN HLFRRGPQPL SWSVRMKVAI GAARGLSFLH
201: NAKSQVIYRD FKASNILLDA EFNSKLSDFG LAKAGPTGDR THVSTQVMGT QGYAAPEYVA TGRLTAKSDV YSFGVVLLEL LSGRRAVDKT ITGMEQNLVD
301: WAKPYLSDKR RLFRIMDTKL EGQYPQKGAF TAATLALQCL NSEAKARPPM TEVLATLEQI EAPKTAGRNS HSEHHRVQTP VRKSPARNRS PLNLTPTASP
401: LPAHRQSPRV H

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.