CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92440
KRH03220
KRH34357
KRH54704
KRH57136
KRH63230

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	KRG92440	AT3G22960.1	21798944
AT3G01300.1	KRH34357	AT3G22960.1	21798944
AT3G01300.1	KRH54704	AT5G61010.1	21798944
AT3G01300.1	KRH63230	AT5G61010.1	21798944
AT5G15080.1	KRH03220	AT4G24690.1	21798944
AT5G15080.1	KRH57136	AT4G24690.1	21798944
AT5G15080.1	KRH54704	AT5G61010.1	21798944
AT5G15080.1	KRH63230	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01126	Soybean	cytosol	98.52	98.52
KRG93494	Soybean	cytosol	83.12	80.9
Solyc05g007050.2.1	Tomato	cytosol	77.0	76.36
PGSC0003DMT400045429	Potato	cytosol	76.58	76.1
Os09t0361100-01	Rice	cytosol, plasma membrane	61.18	75.52
Solyc01g010780.2.1	Tomato	cytosol	75.74	74.64
PGSC0003DMT400002229	Potato	cytosol	75.74	74.48
KRG99168	Soybean	nucleus	76.37	74.33
GSMUA_AchrUn_...	Banana	plastid	68.14	74.25
KRH45845	Soybean	nucleus	75.53	73.51
KRH74775	Soybean	cytosol	75.53	72.91
KRH69360	Soybean	cytosol	75.95	70.87
AT5G15080.1	Thale cress	cytosol	71.1	68.36
TraesCS3B01G241300.1	Wheat	cytosol	68.57	68.13
TraesCS3A01G210700.1	Wheat	cytosol	68.35	67.92
TraesCS3D01G213600.1	Wheat	cytosol	68.35	67.92
AT3G28690.2	Thale cress	cytosol	67.09	66.81
AT3G01300.1	Thale cress	nucleus	68.99	66.73
HORVU3Hr1G051080.3	Barley	cytosol	68.78	66.67
CDY49042	Canola	cytosol	67.72	66.46
Bra039129.1-P	Field mustard	nucleus	67.93	66.26
Bra033053.1-P	Field mustard	cytosol	65.82	66.24
CDY47249	Canola	cytosol	65.82	66.24
Bra006278.1-P	Field mustard	nucleus	70.25	66.07
CDX78606	Canola	nucleus	70.25	66.07
CDY37534	Canola	nucleus	67.93	65.98
CDX70589	Canola	nucleus	70.04	65.87
Bra040508.1-P	Field mustard	nucleus	67.3	65.77
EES03187	Sorghum	cytosol	67.93	65.45
CDY04026	Canola	cytosol	65.19	65.19
Os01t0588500-01	Rice	plasma membrane	67.93	65.18
CDY28689	Canola	nucleus	66.88	65.09
CDY59664	Canola	cytosol	65.61	64.93
TraesCS5A01G193300.2	Wheat	cytosol	68.14	64.73
TraesCS5D01G195800.2	Wheat	cytosol	68.14	64.73
Zm00001d020213_P003	Maize	cytosol	68.35	64.29
EER96629	Sorghum	cytosol	67.93	64.27
Zm00001d044324_P001	Maize	cytosol	67.51	63.74
Zm00001d005647_P002	Maize	cytosol	67.51	63.24
TraesCS5B01G188700.1	Wheat	cytosol	67.93	62.4
HORVU5Hr1G056920.1	Barley	cytosol	67.93	61.45
KRH20145	Soybean	cytosol	54.85	59.5
KRH03664	Soybean	cytosol	54.85	59.09
KRG99951	Soybean	plastid	48.95	56.59
KRH15105	Soybean	cytosol, nucleus	44.94	55.91
KRG97912	Soybean	cytosol	45.36	55.7
KRH49102	Soybean	plastid	47.68	55.12
KRH73031	Soybean	plastid	45.57	55.1
KRH74810	Soybean	cytosol, plastid	47.68	54.99
KRH69316	Soybean	cytosol, plastid	47.68	54.99
KRH75643	Soybean	plastid	46.84	53.75
KRH45870	Soybean	plastid	45.57	53.73
KRH23073	Soybean	cytosol, plastid	47.47	53.7
KRH07892	Soybean	cytosol	29.54	53.64
KRH65832	Soybean	plastid	46.62	53.38
KRG99134	Soybean	plastid	45.78	52.16
KRH18652	Soybean	plastid	41.98	52.09
KRH10259	Soybean	plastid	46.62	51.28
KRH28911	Soybean	plastid	38.82	50.27
KRH29797	Soybean	plastid	43.67	50.24
KRH56930	Soybean	cytosol	42.19	50.0
KRH14658	Soybean	plastid	40.72	49.61
KRH51603	Soybean	mitochondrion, plastid	38.61	49.59
KRH60921	Soybean	cytosol	38.19	48.92
KRH74099	Soybean	plastid	41.56	47.82
KRH14015	Soybean	plastid	41.35	47.57
KRH39445	Soybean	plastid	39.03	46.6
KRG89785	Soybean	plasma membrane, vacuole	40.93	45.65
KRH28912	Soybean	plastid	38.82	45.43
KRH24792	Soybean	cytosol, plastid	44.3	45.36
KRH07906	Soybean	plastid	36.29	41.25
CDY00122	Canola	cytosol	62.87	40.54
KRH07902	Soybean	plastid	32.91	40.31
Bra039049.1-P	Field mustard	cytosol	61.18	37.13
KRH07896	Soybean	plastid	34.81	34.09
KRH15106	Soybean	cytosol	0.84	23.53
Bra008726.1-P	Field mustard	cytosol	68.35	20.49
CDY65043	Canola	cytosol	67.72	20.3

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100802866	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02006021	EnsemblPlantsGene:GLYMA_09G240700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	UniProt:I1L603	InterPro:IPR000719	EnsemblPlants:KRH40135	ProteinID:KRH40135
ProteinID:KRH40135.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF507	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002338613	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:46307806..46311050

Molecular Weight (calculated)

52057.7 Da

IEP (calculated)

9.911

GRAVY (calculated)

-0.414

Length

474 amino acids

Sequence
(BLAST)

001: MGFRNNAIQA GSLDVGKSKV SLQKDGAEKE IGCCVKFCFI GSCIPSRSKV DNSISGTSAN SVEKTSASEK SKKETNAPPG SSTSTSNAES VPSTPKFSEE
101: LKVSSRLRKF TFNELKLATR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNHDGLQGH KEWLAELDIL GDLVHPNLVK LVGFCIEDDQ
201: RLLVYECMPR GSLENHLFRK GSLPLPWSIR MKIALGAAKG LTFLHEEAQR PVIYRDFKTS NILLDAEYNA KLSDFGLAKD GPEGEKTHIS TRVMGTYGYA
301: APEYVMTGHL TSKSDVYSFG VVLLEMLTGR RSIDKNRPNG EHNLVEWARP VLGDRRMLLR IIDPRLEGHF SVKGSQKAAQ LAAQCLSRDP KSRPMMSEVV
401: QALKPLQNLK DMAISSYHFQ VARVDRTMSM PKNGMQAQLA SLSRKGQPVR ILSSPKGPHG SPYHHYIKSP KPNG

Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)

001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT

Arabidopsis Description

Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.