Factsheet for TraesCS3D01G213600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G240200.1
TraesCS2A01G327000.1
TraesCS2B01G257800.1
TraesCS2B01G355000.6
TraesCS2D01G237900.1
TraesCS2D01G335900.1
TraesCS3A01G302600.1
TraesCS3B01G333800.1
TraesCS3D01G299200.1
TraesCS6A01G208300.2
TraesCS6B01G236800.1
TraesCS6D01G191900.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	TraesCS2A01G240200.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2B01G257800.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS2D01G237900.1	AT3G22960.1	21798944
AT3G01300.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT3G01300.1	TraesCS3D01G299200.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS2A01G327000.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS2B01G355000.6	AT4G24690.1	21798944
AT5G15080.1	TraesCS2D01G335900.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6A01G208300.2	AT4G24690.1	21798944
AT5G15080.1	TraesCS6B01G236800.1	AT4G24690.1	21798944
AT5G15080.1	TraesCS6D01G191900.3	AT4G24690.1	21798944
AT5G15080.1	TraesCS3A01G302600.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3B01G333800.1	AT5G61010.1	21798944
AT5G15080.1	TraesCS3D01G299200.1	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G241300.1	Wheat	cytosol	98.95	98.95
TraesCS3A01G210700.1	Wheat	cytosol	98.74	98.74
HORVU3Hr1G051080.3	Barley	cytosol	98.11	95.71
Os01t0588500-01	Rice	plasma membrane	90.57	87.45
EES03187	Sorghum	cytosol	88.47	85.77
Zm00001d044324_P001	Maize	cytosol	87.21	82.87
GSMUA_AchrUn_...	Banana	plastid	71.28	78.16
PGSC0003DMT400045429	Potato	cytosol	74.63	74.63
Solyc05g007050.2.1	Tomato	cytosol	74.63	74.48
VIT_01s0026g01620.t01	Wine grape	cytosol	74.63	74.01
PGSC0003DMT400002229	Potato	cytosol	74.63	73.86
Solyc01g010780.2.1	Tomato	cytosol	74.0	73.39
KRG99168	Soybean	nucleus	74.42	72.9
KRH45845	Soybean	nucleus	74.0	72.48
TraesCS5D01G195800.2	Wheat	cytosol	75.47	72.14
KRH74775	Soybean	cytosol	74.0	71.89
KRH69360	Soybean	cytosol	74.42	69.88
KRH01126	Soybean	cytosol	68.34	68.78
KRH40135	Soybean	cytosol	67.92	68.35
AT5G15080.1	Thale cress	cytosol	68.34	66.13
KRG93494	Soybean	cytosol	67.3	65.91
CDX70589	Canola	nucleus	68.97	65.28
Bra006278.1-P	Field mustard	nucleus	68.97	65.28
CDX78606	Canola	nucleus	68.97	65.28
Bra040508.1-P	Field mustard	nucleus	66.25	65.15
AT3G28690.2	Thale cress	cytosol	64.99	65.13
CDY49042	Canola	cytosol	65.83	65.01
Bra039129.1-P	Field mustard	nucleus	66.04	64.81
CDY59664	Canola	cytosol	64.99	64.72
AT3G01300.1	Thale cress	nucleus	66.46	64.69
CDY28689	Canola	nucleus	66.04	64.68
Bra033053.1-P	Field mustard	cytosol	63.73	64.54
CDY37534	Canola	nucleus	65.83	64.34
CDY47249	Canola	cytosol	63.52	64.33
CDY04026	Canola	cytosol	62.89	63.29
TraesCS7D01G130600.2	Wheat	mitochondrion	53.46	61.59
TraesCS7D01G518500.1	Wheat	cytosol	44.23	60.11
TraesCS4D01G208400.1	Wheat	plastid	45.91	58.71
TraesCS1D01G032600.1	Wheat	plastid	49.27	58.31
TraesCS3D01G535700.1	Wheat	plastid	49.48	55.14
TraesCS5D01G493800.1	Wheat	plastid	46.75	52.47
TraesCS4D01G286100.1	Wheat	plastid	44.03	49.88
TraesCS2D01G038200.1	Wheat	cytosol	39.83	48.84
TraesCS7D01G519800.1	Wheat	cytosol	35.85	46.72
TraesCS7D01G519900.2	Wheat	plastid	39.41	46.31
TraesCS2D01G098200.1	Wheat	plastid	39.41	45.97
TraesCS6D01G235300.1	Wheat	cytosol	40.67	44.29
TraesCS2D01G401500.2	Wheat	cytosol	42.35	44.2
CDY00122	Canola	cytosol	61.84	40.14
Bra039049.1-P	Field mustard	cytosol	62.05	37.9
Bra008726.1-P	Field mustard	cytosol	67.3	20.3
CDY65043	Canola	cytosol	66.88	20.18

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF507	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS3D01G213600	EnsemblPlants:TraesCS3D01G213600.1	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:287476887..287482552

Molecular Weight (calculated)

52548.6 Da

IEP (calculated)

9.760

GRAVY (calculated)

-0.577

Length

477 amino acids

Sequence
(BLAST)

001: MGKEGTRRGQ DVRRRKGKEA AMDEDDAAPP TGCWIRLPRL GGGCMSSGSK VDSSTSGACA NGGENKKVNH SCRDQSAPPA ASGSTTSSNT GSISPSSIVG
101: EELKLAAQLR RFTFNELKCA TRNFRPESLL GEGGFGCVFK GWIEENGTAP MKPGTGLTVA VKTLNHDGLQ GHKEWVAEVD FLGNLQHPHL VKLVGYCIED
201: DQRLLVYEFM PRGSLENHLF RRSFPLPWAI RMKIALGAAK GLAFLHEEAE RPVIYRDFKT SNILLDAEYN AKLSDFGLAK DGPEGDKTHV STRVMGTYGY
301: AAPEYVMTGH LTSKSDVYSF GVVLLEMMSG RRSMDKNRPN GEHNLVEWAR PYLGERRRFY RLVDPRLEGN FSIKGAQKTA QLAHACLSRD PKARPLMSQV
401: VEVLKPLPNL KDMASSSYFF QSMRQERAAS LGNPNGSQSM KAQSTFARNG VQPMRSLSYG PHASPYRQSP RPNDKQP

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.