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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX92649
CDY02176
CDY03427
CDY08946
CDY11029
CDY23090
CDY24845
CDY34302

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G15080.1 CDX92649 AT4G24690.1 21798944
AT5G15080.1 CDY03427 AT4G24690.1 21798944
AT5G15080.1 CDY08946 AT4G24690.1 21798944
AT5G15080.1 CDY11029 AT4G24690.1 21798944
AT5G15080.1 CDY24845 AT4G24690.1 21798944
AT5G15080.1 CDY34302 AT4G24690.1 21798944
AT5G15080.1 CDY02176 AT5G61010.1 21798944
AT5G15080.1 CDY23090 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008726.1-P Field mustard cytosol 96.77 96.77
CDY59664 Canola cytosol 28.72 94.78
AT5G15080.1 Thale cress cytosol 26.38 84.58
CDX78606 Canola nucleus 26.88 84.33
CDX70589 Canola nucleus 26.82 84.13
CDY28689 Canola nucleus 24.48 79.47
CDY49042 Canola cytosol 24.1 78.88
CDY37534 Canola nucleus 24.23 78.48
Os09t0361100-01 Rice cytosol, plasma membrane 18.47 76.04
PGSC0003DMT400045429 Potato cytosol 22.14 73.38
GSMUA_AchrUn_... Banana plastid 20.18 73.33
PGSC0003DMT400002229 Potato cytosol 22.26 73.03
Solyc05g007050.2.1 Tomato cytosol 22.07 73.01
Solyc01g010780.2.1 Tomato cytosol 22.2 72.97
CDY47249 Canola cytosol 20.43 68.58
CDY04026 Canola cytosol 20.37 67.93
KRH01126 Soybean cytosol 20.37 67.93
KRH40135 Soybean cytosol 20.3 67.72
TraesCS3B01G241300.1 Wheat cytosol 20.37 67.51
TraesCS3A01G210700.1 Wheat cytosol 20.24 67.09
TraesCS3D01G213600.1 Wheat cytosol 20.18 66.88
EES03187 Sorghum cytosol 20.49 65.85
HORVU3Hr1G051080.3 Barley cytosol 20.37 65.85
KRG93494 Soybean cytosol 20.24 65.71
Os01t0588500-01 Rice plasma membrane 20.37 65.18
TraesCS5D01G195800.2 Wheat cytosol 20.56 65.13
TraesCS5A01G193300.2 Wheat cytosol 20.56 65.13
Zm00001d044324_P001 Maize cytosol 20.49 64.54
Zm00001d020213_P003 Maize cytosol 20.3 63.69
EER96629 Sorghum cytosol 20.18 63.67
TraesCS5B01G188700.1 Wheat cytosol 20.56 62.98
Zm00001d005647_P002 Maize cytosol 19.86 62.06
HORVU5Hr1G056920.1 Barley cytosol 20.43 61.64
CDY10453 Canola plastid 13.85 56.15
CDY40347 Canola plastid 13.79 55.9
CDY02940 Canola cytosol 12.21 55.14
CDY48100 Canola plastid 13.28 54.12
CDX76093 Canola cytosol, plastid 11.95 54.0
CDX80814 Canola plastid 13.35 53.96
CDY55560 Canola plastid 13.35 53.96
CDY04848 Canola plastid 13.22 53.87
CDY06271 Canola plastid 13.79 53.69
CDY06715 Canola plastid 13.79 53.43
CDY09904 Canola plastid 13.66 53.2
CDX95143 Canola plastid 13.73 53.19
CDX93249 Canola plastid 12.84 53.0
CDY39519 Canola cytosol 13.22 52.78
CDY07022 Canola plastid 12.71 52.76
CDX77220 Canola cytosol, plastid 13.85 52.39
CDY31741 Canola cytosol, plastid 13.85 52.39
CDX74847 Canola cytosol 12.65 52.36
CDY20465 Canola cytosol 12.78 52.33
CDY47885 Canola plastid 13.6 52.06
CDY49086 Canola cytosol, plastid 13.66 51.43
CDY40221 Canola plastid 12.46 51.3
CDY07643 Canola plastid 12.65 50.89
CDY24954 Canola plastid 12.65 50.89
CDY39318 Canola cytosol, plastid 13.54 50.83
CDY45196 Canola plastid 13.73 50.82
CDX83305 Canola plastid 12.97 50.74
CDX81634 Canola plastid 13.73 50.58
CDY53554 Canola plastid 13.73 50.58
CDY52768 Canola plastid 12.71 50.5
CDX95754 Canola plastid 12.9 50.49
CDY38760 Canola plastid 12.46 50.0
CDY11655 Canola plastid 12.4 49.75
CDY03036 Canola plastid 13.79 49.32
CDY46426 Canola plastid 12.78 49.27
CDY41675 Canola plastid 13.79 49.1
CDY67404 Canola plastid 13.79 48.99
CDX71350 Canola plastid 12.02 46.34
CDY31372 Canola plastid 12.02 46.34
CDY40618 Canola plastid 11.26 45.76
CDY47489 Canola plastid 11.89 45.63
CDY26797 Canola plastid 11.89 45.19
CDY24815 Canola plastid 11.76 44.08
CDY41645 Canola plastid 11.76 44.08
CDX75515 Canola plastid 11.89 44.03
CDX69153 Canola plastid 11.95 43.95
CDX72550 Canola plastid 10.88 43.88
CDY24816 Canola cytosol, plastid 10.12 43.6
CDX72549 Canola plastid 11.95 43.45
CDY00122 Canola cytosol 20.05 43.13
CDY40619 Canola plastid 11.83 42.99
CDX85943 Canola plastid 11.76 42.37
CDX87609 Canola cytosol 12.02 42.32
CDX88265 Canola cytosol 11.83 41.93
CDX68102 Canola plastid 11.7 41.76
Protein Annotations
KEGG:04070+2.7.4.24+2.7.4.21Gene3D:1.10.510.10MapMan:18.4.1.37.1MapMan:27.5.3.4Gene3D:3.30.200.20Gene3D:3.30.470.100
Gene3D:3.40.50.11950GO:A0A078JBP8UniProt:A0A078JBP8InterPro:Acid_Pase_ASEnsemblPlants:CDY65043ProteinID:CDY65043
ProteinID:CDY65043.1ncoils:CoilGO:GO:0000166GO:GO:0000829GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00044075001
InterPro:His_PPase_superfamInterPro:His_Pase_VIP1InterPro:His_Pase_clade-2InterPro:IPR000719InterPro:IPR029033InterPro:Kinase-like_dom_sf
PFAM:PF00328PFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108ScanProsite:PS00616PFscan:PS50011
PANTHER:PTHR12750PANTHER:PTHR12750:SF12InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF53254SUPFAM:SSF56059
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE1BFASEG:seg:
Description
BnaA10g29770DBnaA10g29770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBP8]
Coordinates
chrLK034638:-:800..11767
Molecular Weight (calculated)
177581.0 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.496
Length
1581 amino acids
Sequence
(BLAST)
0001: MGVVEEGGAG VVDRKITIGV CVMEKKVFSA PMGQIMDRLQ AFGEFEIIHF GDKVILDDPV ESWPICDCLI AFHSSGYPLE KVQAYSSLRK PFLVNELDPQ
0101: YLLHDRRKVY EHLEMYGIPV PRYACVNRTE PNQDLDYFVE EEDFIEVNGE VFWKPFVEKP VNAPLLESLI SLYWLSACFA GDDHSIMIYY PSSAGGGMKE
0201: LFRKVGNRSS EFHPEVRRVR REGSYIYEEF LPTGGTDVKV YTVGPEYAHA EARKSPVVDG VVMRNPDGKE VRYPVLLTPA EKQMAREVCI AFRQSVCGFD
0301: LLRSEGSSYV CDVNGWSFVK NSYKYYDDAA CVLRNMFFDA KAPHLSSTIP PILPWKINEP VQSNEGLTRQ GSGVIGTFGQ SEELRCVIAV VRHGDRTPKQ
0401: KVKLKVTEEK LLNLMLKYNG GKPRAETKLK TAVQLQDLLD ATRMLIPRSR PGESDSDAED LEHADKLRQV KAVLEEGGHF SGIYRKVQLK PLKWDKVTKS
0501: DGDGEEERPV EALMILKYGG VLTHAGRQQA EELGRYFRNN MYPGEGTGLL RLHSTYRHDL KIYSSDEGRV QMSAAAFAKG LLDLEGQLTP ILVSLVSKDS
0601: SMLDGLDTAS SEMEEAKAQL NEIITAGTKL VHDYVSSESP WMIDGVGLPP QANESLPELV KLAKKVTEQV RLLAKDEEEN PTEPSAYDVV PPYDQAKALG
0701: KSNIDVGRIA AGLPCGSEGF LLMYARWRKL EKELYNERRD RFDITQIPDV YDSCKYDLLH NSHLNLKGLD ELFKVAQLLA DGVIPNEYGI NPQQKLKIGS
0801: KIARRLLGKI LIDLRNTREE AMSVAELKKS QDQVSVSLCS PRKEDRCSQP KLFIKSDELR RPNTGENKDD DEDKETKYRL DPKYANVMTP ERHVRTRLYF
0901: TSESHIHSLM NVLRYCNLDE SLQGEEGLVC QSALERLCKT KELDYMSYIV LRLFENTEVS LEDPKRFRIE LTFSRGADLS PLEKNDEEAE SLLREHTLPI
1001: MGPERLQEVS SCLTLETMEK MIRPFAMPAE DFPPASIPAG FSGYFSKSAA VLERLVKLWP FNKNSTSNAK KPTTTKNTKG EKTQHISRRK MGLDDTDAVK
1101: AKGNLQSNES ESHKRKKNNS KGEEEEREGS GCWLNLRFMF GCVPSKPDVD GVSSSSSSLY ATTCPTVESK QANEKPNDQP VSSTTTTTTT SNAGSSSSTP
1201: MISEELKVYS NLTKFTFNDL KLATRNFRPE SLLGEGGFGC VFKGWIQEHG TAPVKPGTGL TVAVKTLNPD GLQGHKEWLA EINFLGNLLH PNLVKLVGYC
1301: IEDDQRLLVY EFMPRGSLEN HLFRRSLPLP WCIRMKIAVG AAKGLSFLHE EALKPVIYRD FKTSNILLDS DYNAKLSDFG LAKDAPDEGK THVSTRVMGT
1401: YGYAAPEYVM TGHLTSKSDV YSFGVVLLEM LTGRRSMDKN RPNGEHNLVE WARPHLLDKR RFYKLLDPRL EGHFSIKGAQ KVIQLAAQCL SRDPKVRPKM
1501: SDVVEALKPL PHLKDMASSS YYFQTMQAER LKNGLGRSQG FGSRKGQPQP PQPVFRTMSS PHGASPYRPQ IPSPKPKGAT T
Best Arabidopsis Sequence Match ( AT5G15070.1 )
(BLAST)
0001: MGVEEGAGVD KKITIGVCVM EKKVFSAPMG QIMDRIHAFG EFEIIHFGDK VILEDPVESW PICDCLIAFY SSGYPLEKVQ AYSSLRKPFL VNELDPQYLL
0101: HDRRKVYEHL EMYGIPVPRY ACVNRKVPDE DLDYFVEEED FVEVKGERFW KPFVEKPVNG DDHSIMIYYP SSAGGGMKEL FRKVGNRSSE FHPDVRRVRR
0201: EGSYIYEEFM PTGGTDVKVY TVGPEYAHAE ARKSPVVDGV VMRNPDGKEV RYPVLLTPAE KQMAREVCIA FRQAVCGFDL LRSEGSSYVC DVNGWSFVKN
0301: SYKYYDDAAC VLRKMFLDAK APHLSSTIPP ILPWKINEPV QSNEGLTRQG SGIIGTFGQS EELRCVIAIV RHGDRTPKQK VKLKVTEEKL LNLMLKYNGG
0401: KPRAETKLKT AVQLQDLLDA TRMLIPRARS GESDSDAEDL EHADKLRQVK AVLEEGGHFS GIYRKVQLKP LKWVNVPKSD GEGEEERPVE ALMVLKYGGV
0501: LTHAGRKQAE ELGRYFRNNM YPGEGTGLLR LHSTYRHDLK IYSSDEGRVQ MSAAAFAKGL LDLEGQLTPI LVSLVSKDSS MLDGLDNASS EMEAAKAQLN
0601: EIITAGSKMV HDHVSSELPW MTDGAGLPPH ADEHLPELVK LAKKVTEQVR LLAQDEHENL AEPSAYDVVP PYDQAKALGK SNIDVGRIAA GLPCGSEGFL
0701: LMFARWRKLE RDLYNERRER FDITQIPDVY DSCKYDLLHN SHLDLKGLDE LFKVAQLLAD GVIPNEYGIN PQQKLKIGSK IARRLLGKIL IDLRNTREEA
0801: MSVAELKNSQ DQVSVSLYSS RKEDRYSQPK LFVKSDELRR PSTGENKEED DDKETKYRLD PKYANVMTPE RHVRTRLYFT SESHIHSLMN VLRYCNLDES
0901: LQGEESLVCQ SALDRLCKTK ELDYMSYVVL RLFENTEISL DDPKRFRIEL TFSRGADLSP LEKKDEEAES LLREHTLPIM GPERLQEVGS CLTLETMEKM
1001: IRPFAMPAED FPPPCTPAGF SGYFSKSAAV LERLVKLWPF HKNTSNGKS
Arabidopsis Description

SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.