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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87609 Canola cytosol 97.09 96.44
CDX85943 Canola plastid 81.39 82.69
CDX68102 Canola plastid 82.06 82.62
AT1G76360.1 Thale cress plastid 81.39 75.0
KRH60921 Soybean cytosol 48.43 58.38
KRH51603 Soybean mitochondrion, plastid 47.31 57.18
Solyc04g082500.2.1 Tomato nucleus 52.69 56.9
PGSC0003DMT400025864 Potato plastid 53.14 56.83
VIT_18s0122g01270.t01 Wine grape plastid 52.02 55.5
EER95575 Sorghum cytosol 46.86 53.59
VIT_18s0122g01260.t01 Wine grape plastid 53.36 53.12
GSMUA_Achr4P04920_001 Banana plastid 45.07 52.07
GSMUA_Achr3P14810_001 Banana plastid 48.43 52.05
Zm00001d048342_P001 Maize plastid 46.86 51.23
Os06t0727400-01 Rice plasma membrane 46.64 50.24
EER90433 Sorghum plastid 47.09 50.12
CDY31372 Canola plastid 45.96 50.0
GSMUA_Achr1P18020_001 Banana plastid 47.98 49.88
Zm00001d014850_P002 Maize plastid 45.96 49.64
TraesCS2D01G038200.1 Wheat cytosol 43.27 49.61
GSMUA_Achr3P26960_001 Banana plastid 42.38 49.61
CDY47489 Canola plastid 45.74 49.51
TraesCS7B01G473700.1 Wheat plastid 45.74 49.51
CDX71350 Canola plastid 45.52 49.51
CDY48100 Canola plastid 43.05 49.48
TraesCS7A01G550300.1 Wheat plastid 45.96 49.28
TraesCSU01G105900.1 Wheat plastid 45.96 49.28
Os02t0118200-01 Rice plasma membrane 47.09 49.18
CDY26797 Canola plastid 45.74 49.04
CDY04848 Canola plastid 42.6 48.97
CDY40347 Canola plastid 42.6 48.72
HORVU4Hr1G082100.2 Barley cytosol, nucleus, plastid 45.74 48.69
TraesCS6B01G069800.1 Wheat plastid 47.53 48.62
Zm00001d054014_P002 Maize cytosol, plastid 46.86 48.6
TraesCS6A01G052100.2 Wheat plastid 47.31 48.51
HORVU6Hr1G010050.1 Barley plastid 47.31 48.39
CDY10453 Canola plastid 42.15 48.21
TraesCSU01G111800.1 Wheat plastid 47.09 48.17
CDY40618 Canola plastid 41.93 48.07
Zm00001d027509_P002 Maize cytosol 40.36 48.0
EES04370 Sorghum plastid 46.86 47.94
TraesCS2B01G422500.1 Wheat cytosol 48.43 47.68
KXG26902 Sorghum cytosol 49.1 47.51
Zm00001d026126_P001 Maize plastid 48.43 47.37
CDY06271 Canola plastid 43.05 47.29
CDY09904 Canola plastid 43.05 47.29
TraesCS6D01G235300.1 Wheat cytosol 46.41 47.26
TraesCS2A01G039600.1 Wheat cytosol 44.62 47.16
GSMUA_Achr2P11330_001 Banana cytosol 36.77 47.13
CDX80814 Canola plastid 41.26 47.06
CDY06715 Canola plastid 43.05 47.06
CDY55560 Canola plastid 41.26 47.06
TraesCS2A01G404600.1 Wheat cytosol 48.21 47.05
TraesCS2D01G401500.2 Wheat cytosol 48.21 47.05
CDX95143 Canola plastid 42.83 46.81
CDX76093 Canola cytosol, plastid 36.55 46.57
CDY02940 Canola cytosol 36.55 46.57
CDX72550 Canola plastid 40.81 46.43
Os02t0670100-00 Rice cytosol, plasma membrane 47.98 46.32
CDY39519 Canola cytosol 41.03 46.21
TraesCS6A01G253700.1 Wheat cytosol 46.86 46.14
Zm00001d015012_P001 Maize plastid 46.64 45.92
EES05745 Sorghum cytosol 48.65 45.88
HORVU6Hr1G064690.4 Barley cytosol 46.86 45.83
CDY07022 Canola plastid 39.01 45.67
CDY47885 Canola plastid 42.15 45.52
CDX93249 Canola plastid 39.01 45.43
CDY07643 Canola plastid 39.91 45.29
CDY24954 Canola plastid 39.91 45.29
Zm00001d051424_P001 Maize plastid 45.29 45.29
CDY24816 Canola cytosol, plastid 37.22 45.23
TraesCS6B01G271700.1 Wheat cytosol 46.64 45.22
Os04t0563900-00 Rice plasma membrane 47.98 45.05
CDY40221 Canola plastid 38.79 45.05
CDY24815 Canola plastid 42.6 45.02
CDY52768 Canola plastid 40.13 44.97
CDY11655 Canola plastid 39.69 44.92
CDY38760 Canola plastid 39.69 44.92
CDX74847 Canola cytosol 38.34 44.76
CDX77220 Canola cytosol, plastid 41.93 44.74
CDY31741 Canola cytosol, plastid 41.93 44.74
TraesCS6A01G051600.1 Wheat cytosol 37.44 44.53
CDY41645 Canola plastid 41.93 44.31
CDY20465 Canola cytosol 38.34 44.3
CDY49086 Canola cytosol, plastid 41.7 44.29
CDX75515 Canola plastid 42.38 44.26
CDY39318 Canola cytosol, plastid 41.48 43.94
CDY46426 Canola plastid 40.36 43.9
HORVU6Hr1G009900.9 Barley mitochondrion 32.96 43.88
CDY53554 Canola plastid 41.93 43.59
CDX83305 Canola plastid 39.46 43.56
CDX95754 Canola plastid 39.46 43.56
CDX69153 Canola plastid 41.93 43.49
CDX72549 Canola plastid 42.38 43.45
CDY40619 Canola plastid 42.38 43.45
CDX81634 Canola plastid 41.7 43.36
TraesCS6B01G069300.1 Wheat cytosol 36.55 43.35
TraesCSU01G111300.1 Wheat cytosol, mitochondrion, plastid 36.1 42.93
TraesCSU01G110700.2 Wheat cytosol 36.1 42.82
CDY45196 Canola plastid 40.81 42.62
TraesCS2B01G052500.1 Wheat cytosol 43.27 41.77
CDY41675 Canola plastid 41.26 41.44
CDY03036 Canola plastid 41.03 41.4
CDY67404 Canola plastid 41.26 41.35
HORVU7Hr1G121690.5 Barley plastid 45.52 40.85
CDY59664 Canola cytosol 41.26 38.41
CDY47249 Canola cytosol 39.46 37.37
CDY49042 Canola cytosol 40.36 37.27
CDY37534 Canola nucleus 40.36 36.89
CDY04026 Canola cytosol 39.01 36.71
CDY28689 Canola nucleus 39.91 36.55
CDX78606 Canola nucleus 40.81 36.11
CDX70589 Canola nucleus 40.58 35.91
CDY00122 Canola cytosol 39.01 23.67
CDY65043 Canola cytosol 41.93 11.83
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078DGC3EnsemblPlants:CDX88265ProteinID:CDX88265
ProteinID:CDX88265.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00147759001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF5
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EED842
SEG:seg:::::
Description
BnaC06g37090D
Coordinates
chrLK031855:-:68921..72179
Molecular Weight (calculated)
49619.7 Da
IEP (calculated)
10.290
GRAVY (calculated)
-0.617
Length
446 amino acids
Sequence
(BLAST)
001: MGNFCPNGSS SVGHEEIPVS TKPLPAVKHG QNPVNQKAPP PVVVMPPARG SNPKFPAAET RTVDNTPRQK QQEKKPRSVD DPSREKQQEK KPRSVETPPS
101: KPVEKQGVGK KAVPPSGKIV TPNLKMFTLT DLMTATKNFR PESMIGEGGF GQVFKGWVDE ETLSPSRAGV GIPIAVKKSN PDSAQGLHEW QARKFHHPNL
201: VKLLGYCWEE NQFLLVYEFL PKGSLENHLF SKGDGLTWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS NILLDSNFNA KLSDFGLAKH GPINGYSHVT
301: TRVMGTQGYA APEYVATGHL YVLSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP VLSQKKKIQK LMDPRLEHKY PLLAVTKTAA LILRCLEADP
401: KNRPPMDDVL RELEIVRTIR EQPKEEKRNR NNGHGSPHVR KTGRTR
Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)
001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG
Arabidopsis Description
At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.