Factsheet for VIT_18s0122g01270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
cytosol 2
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01260.t01	Wine grape	plastid	91.87	85.71
KRH60921	Soybean	cytosol	56.94	64.32
KRH51603	Soybean	mitochondrion, plastid	56.46	63.96
PGSC0003DMT400025864	Potato	plastid	63.4	63.55
Solyc04g082500.2.1	Tomato	nucleus	61.96	62.71
GSMUA_Achr4P04920_001	Banana	plastid	54.31	58.81
EER95575	Sorghum	cytosol	53.11	56.92
GSMUA_Achr1P18020_001	Banana	plastid	57.66	56.18
GSMUA_Achr3P26960_001	Banana	plastid	51.2	56.17
TraesCS2D01G038200.1	Wheat	cytosol	52.15	56.04
GSMUA_Achr3P14810_001	Banana	plastid	55.5	55.9
VIT_04s0044g00050.t01	Wine grape	plastid	40.43	55.59
Zm00001d048342_P001	Maize	plastid	53.11	54.41
Os02t0118200-01	Rice	plasma membrane	55.26	54.1
VIT_03s0038g03800.t01	Wine grape	plastid	54.78	53.76
Os06t0727400-01	Rice	plasma membrane	53.11	53.62
Zm00001d054014_P002	Maize	cytosol, plastid	54.78	53.26
TraesCS6B01G069800.1	Wheat	plastid	55.5	53.21
HORVU6Hr1G010050.1	Barley	plastid	55.26	52.98
Bra008255.1-P	Field mustard	plastid	53.83	52.94
TraesCS7B01G473700.1	Wheat	plastid	52.15	52.91
GSMUA_Achr2P11330_001	Banana	cytosol	44.02	52.87
TraesCS6A01G052100.2	Wheat	plastid	55.02	52.87
TraesCSU01G111800.1	Wheat	plastid	55.02	52.75
EER90433	Sorghum	plastid	52.63	52.51
TraesCS7A01G550300.1	Wheat	plastid	52.15	52.4
Zm00001d014850_P002	Maize	plastid	51.67	52.3
TraesCSU01G105900.1	Wheat	plastid	51.91	52.16
TraesCS2A01G039600.1	Wheat	cytosol	52.63	52.13
CDX87609	Canola	cytosol	55.98	52.12
CDX88265	Canola	cytosol	55.5	52.02
EES04370	Sorghum	plastid	54.07	51.83
KXG26902	Sorghum	cytosol	56.7	51.41
Zm00001d026126_P001	Maize	plastid	55.98	51.32
CDX85943	Canola	plastid	53.83	51.25
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	50.72	50.6
Bra003724.1-P	Field mustard	plastid	53.83	50.34
CDX68102	Canola	plastid	53.11	50.11
TraesCS2B01G422500.1	Wheat	cytosol	54.07	49.89
Zm00001d015012_P001	Maize	plastid	54.07	49.89
TraesCS6D01G235300.1	Wheat	cytosol	51.91	49.54
Bra015757.1-P	Field mustard	cytosol, plastid	48.09	49.51
AT1G76360.1	Thale cress	plastid	57.18	49.38
Zm00001d027509_P002	Maize	cytosol	44.02	49.07
TraesCS2A01G404600.1	Wheat	cytosol	53.35	48.8
TraesCS2D01G401500.2	Wheat	cytosol	53.11	48.58
HORVU6Hr1G064690.4	Barley	cytosol	52.87	48.46
VIT_08s0007g00420.t01	Wine grape	plastid	46.89	48.4
TraesCS6A01G253700.1	Wheat	cytosol	52.39	48.34
Os02t0670100-00	Rice	cytosol, plasma membrane	52.87	47.84
HORVU6Hr1G009900.9	Barley	mitochondrion	38.28	47.76
TraesCS6A01G051600.1	Wheat	cytosol	42.82	47.73
TraesCS6B01G271700.1	Wheat	cytosol	52.39	47.61
TraesCS6B01G069300.1	Wheat	cytosol	42.82	47.61
Os04t0563900-00	Rice	plasma membrane	54.07	47.58
EES05745	Sorghum	cytosol	53.59	47.36
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	42.34	47.2
VIT_01s0026g01880.t01	Wine grape	cytosol	47.13	46.9
TraesCSU01G110700.2	Wheat	cytosol	42.11	46.81
Zm00001d051424_P001	Maize	plastid	49.28	46.19
VIT_13s0019g01080.t01	Wine grape	plastid	44.5	46.04
VIT_06s0004g04810.t01	Wine grape	plastid	48.09	45.48
VIT_06s0009g01810.t01	Wine grape	plastid	43.78	45.41
TraesCS2B01G052500.1	Wheat	cytosol	49.76	45.02
VIT_11s0016g05720.t01	Wine grape	cytosol	45.69	44.52
HORVU7Hr1G121690.5	Barley	plastid	51.91	43.66
VIT_14s0108g00380.t01	Wine grape	cytosol	46.41	40.84
VIT_01s0026g01620.t01	Wine grape	cytosol	45.22	39.29

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100259897	wikigene:100259897	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CBI40719
ProteinID:CBI40719.3	UniProt:D7UDA4	EMBL:FN596759	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100259897	wikigene:LOC100259897	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF5	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC59939	UniParc:UPI0001BE5324	ArrayExpress:VIT_18s0122g01270
EnsemblPlantsGene:VIT_18s0122g01270	EnsemblPlants:VIT_18s0122g01270.t01	unigene:Vvi.11804	RefSeq:XP_002272452	RefSeq:XP_002272452.2	RefSeq:XP_019082272.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr18:+:859792..862790

Molecular Weight (calculated)

46014.2 Da

IEP (calculated)

10.019

GRAVY (calculated)

-0.581

Length

418 amino acids

Sequence
(BLAST)

001: MGNCCGAQAN VNPASRKPPS PELSKNNIKQ DKSIKERSGS GSGNGSSNGG EKTEIAETGT IITPNLKMFT FAELKSATRN FRPHTMLGEG GFGRVFKGWV
101: DEKTYAPTKV SVGIPVAVKK SNPESEQGLK EWQSEVKFLG KFTHPNLVKL LGYCCEDQQF LLVYEYMHKG SLENHLFKLG GAESLTWEIR LKIAIGAARG
201: LAFLHTSEKT VIYRDFKSSN ILLDGDYNAK LSDFGLAKLG PSDGDSHVTT QIVGTYGYAA PEYIATGHLY VKSDVYGFGV VLLEMLTGKQ TLDINRPPGQ
301: LNLVEWTKPL LPNKRKLKKI MDPRLRDQYP LKAATQVAEL ILKCLESDPK NRPSMEEVLE TLKRINEIKE KPNSKEAKAA TTQPQPHHHR SPHRPKHGGT
401: GAGIGARTPP HGRTGRRG

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.