Factsheet for VIT_13s0019g01080.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	59.65	79.8
GSMUA_Achr8P34290_001	Banana	plastid	70.79	72.41
VIT_08s0007g00420.t01	Wine grape	plastid	72.28	72.1
GSMUA_Achr6P15230_001	Banana	plastid	67.82	71.73
GSMUA_Achr11P...	Banana	cytosol	65.84	71.12
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	72.52	70.26
HORVU3Hr1G115860.6	Barley	plastid	49.51	69.93
KRH73031	Soybean	plastid	67.57	69.64
Solyc04g011520.2.1	Tomato	nucleus	67.82	69.54
KRG97912	Soybean	cytosol	66.34	69.43
Os05t0110900-01	Rice	plasma membrane	67.82	69.37
TraesCS1D01G032600.1	Wheat	plastid	69.06	69.23
TraesCS1A01G031200.1	Wheat	plastid	69.06	69.23
TraesCS4A01G096900.1	Wheat	plastid	63.37	68.63
TraesCS1B01G038800.1	Wheat	plastid	68.56	68.56
PGSC0003DMT400071329	Potato	plastid	66.83	68.53
KRH15105	Soybean	cytosol, nucleus	64.6	68.5
TraesCS4D01G208400.1	Wheat	plastid	63.12	68.36
TraesCS4B01G207500.1	Wheat	plastid	62.87	68.1
TraesCS7D01G518500.1	Wheat	cytosol	59.16	68.09
TraesCS7B01G448200.1	Wheat	cytosol	59.65	68.08
EES18885	Sorghum	plastid	67.82	67.65
VIT_06s0004g04810.t01	Wine grape	plastid	73.76	67.42
Os03t0274800-01	Rice	plasma membrane	62.38	67.38
GSMUA_Achr10P...	Banana	plastid	69.31	67.15
Os01t0973500-01	Rice	plasma membrane	67.33	66.67
HORVU4Hr1G059750.3	Barley	plastid	61.88	66.31
GSMUA_Achr10P...	Banana	plastid	67.33	65.86
Zm00001d011066_P004	Maize	plastid	67.08	65.46
EER92482	Sorghum	plastid	60.89	64.74
GSMUA_Achr8P02170_001	Banana	plastid	60.15	64.46
TraesCS3D01G535700.1	Wheat	plastid	67.57	63.78
TraesCS3A01G530200.1	Wheat	plastid	67.57	63.64
TraesCS3B01G600300.1	Wheat	plastid	67.57	63.64
EER93184	Sorghum	plastid	65.59	63.4
Os03t0821900-01	Rice	plastid	65.59	62.5
TraesCS5D01G493800.1	Wheat	plastid	65.35	62.12
TraesCS5B01G493500.1	Wheat	plastid	65.35	62.12
Zm00001d034662_P001	Maize	plastid	64.36	62.05
Zm00001d012958_P001	Maize	plastid	63.86	61.72
TraesCS5A01G480600.1	Wheat	plastid	65.35	61.11
Zm00001d028613_P001	Maize	plastid	60.4	60.25
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	52.72	59.5
TraesCS7B01G449500.1	Wheat	cytosol	50.74	59.08
HORVU5Hr1G113300.2	Barley	mitochondrion	65.1	58.97
TraesCS7A01G532700.1	Wheat	cytosol	52.97	58.95
VIT_01s0026g01880.t01	Wine grape	cytosol	58.42	56.19
TraesCS7D01G519800.1	Wheat	cytosol	49.26	54.37
KRH15106	Soybean	cytosol	2.23	52.94
TraesCS7D01G519900.2	Wheat	plastid	52.72	52.46
VIT_04s0044g00050.t01	Wine grape	plastid	38.86	51.64
VIT_06s0009g01810.t01	Wine grape	plastid	50.49	50.62
VIT_14s0108g00380.t01	Wine grape	cytosol	58.66	49.89
VIT_11s0016g05720.t01	Wine grape	cytosol	51.98	48.95
VIT_01s0026g01620.t01	Wine grape	cytosol	57.43	48.23
VIT_03s0038g03800.t01	Wine grape	plastid	50.74	48.12
VIT_18s0122g01270.t01	Wine grape	plastid	46.04	44.5
VIT_18s0122g01260.t01	Wine grape	plastid	47.28	42.63

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246192	wikigene:100246192	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20
ProteinID:CBI31685	ProteinID:CBI31685.3	UniProt:D7TLU8	EMBL:FN595998	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246192	wikigene:LOC100246192	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF276	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000198472F	ArrayExpress:VIT_13s0019g01080
EnsemblPlantsGene:VIT_13s0019g01080	EnsemblPlants:VIT_13s0019g01080.t01	unigene:Vvi.22591	RefSeq:XP_002283701	RefSeq:XP_002283701.1	SEG:seg

Description

No Description!

Coordinates

chr13:-:2772502..2775186

Molecular Weight (calculated)

44665.0 Da

IEP (calculated)

10.012

GRAVY (calculated)

-0.454

Length

404 amino acids

Sequence
(BLAST)

001: MGGCLSSQIK AENLLYIGIK SRCGSNDGKY LSGSSSSKVS SASVPTTPRT DGEILQSSNL KSFFFSELRT ATRNFRPDSV LGEGGFGCVF KGWIDEKAFT
101: AAKPGTGMVI AVKKLNQEGF QGHKEWLAEI NYLGQLYHPN LVKLIGYCLE DDHRLLVYEF MPKGSLEHHL FRRGSYFQPL SWSLRMKVAL GAAKGLAFLH
201: SNSVQVIYRD FKTSNILLDS NYNAKLSDFG LAKDGPTGDK SHVSTRVMGT YGYAAPEYLA TGHLTTRSDV YSFGVVLLEM LSGRRAVDKN RPSGEHNLVE
301: WARPYLASKR KIFHVLDSRI QGQFSLNGAH GAARVAIQCL STEPKHRPNM DQVVTALEQL QADSNNTTAS QNRPRPNFHN SSSNGPKHNR TAYPRPTRSP
401: AHQT

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.