Factsheet for VIT_11s0016g05720.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20145	Soybean	cytosol	90.44	88.79
KRH03664	Soybean	cytosol	90.21	87.95
Solyc07g007980.2.1	Tomato	nucleus	84.62	82.5
PGSC0003DMT400079361	Potato	cytosol	84.62	75.78
Zm00001d045191_P001	Maize	mitochondrion	69.0	73.09
Os06t0168800-01	Rice	plasma membrane	69.7	72.75
KXG19409	Sorghum	mitochondrion	69.0	72.2
TraesCS7A01G131300.1	Wheat	mitochondrion	67.6	70.05
TraesCS7B01G031900.1	Wheat	mitochondrion	67.6	70.05
TraesCS7D01G130600.2	Wheat	mitochondrion	67.6	70.05
HORVU7Hr1G027480.3	Barley	plastid	67.83	69.95
VIT_14s0108g00380.t01	Wine grape	cytosol	60.37	54.53
VIT_01s0026g01620.t01	Wine grape	cytosol	60.84	54.26
VIT_13s0019g01080.t01	Wine grape	plastid	48.95	51.98
VIT_08s0007g00420.t01	Wine grape	plastid	48.02	50.86
VIT_01s0026g01880.t01	Wine grape	cytosol	48.72	49.76
VIT_06s0004g04810.t01	Wine grape	plastid	50.58	49.09
VIT_04s0044g00050.t01	Wine grape	plastid	33.1	46.71
VIT_06s0009g01810.t01	Wine grape	plastid	43.59	46.4
VIT_18s0122g01270.t01	Wine grape	plastid	44.52	45.69
VIT_03s0038g03800.t01	Wine grape	plastid	44.06	44.37
VIT_18s0122g01260.t01	Wine grape	plastid	45.92	43.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100256105	wikigene:100256105	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CBI28238
ProteinID:CBI28238.3	UniProt:D7TC53	EMBL:FN595756	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100256105	wikigene:LOC100256105	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF125	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TIGR:TC57752	UniParc:UPI0001BE3363	ArrayExpress:VIT_11s0016g05720
EnsemblPlantsGene:VIT_11s0016g05720	EnsemblPlants:VIT_11s0016g05720.t01	RefSeq:XP_002285390	RefSeq:XP_002285390.2	RefSeq:XP_003633081	RefSeq:XP_003633081.1

Description

No Description!

Coordinates

chr11:-:5210804..5215513

Molecular Weight (calculated)

47774.0 Da

IEP (calculated)

9.569

GRAVY (calculated)

-0.506

Length

429 amino acids

Sequence
(BLAST)

001: MEKNCGCWAV LKRGVRGSCK SSASRDSVNT IPRTSLVYDA ATETRYLNAS NRELYAPNEA QLSSDNPNPS ATENKDVCQL LQFTFQELKS ATGNFRPDSI
101: LGEGGFGYVF KGWIEENGTA PAKPGSGITV AVKSLKPDGL QGHREWVAEV GFLGQLHHPN LVKLIGYCIE DDQRLLVYEF MTRGSLENHL FRRTIPLPWS
201: NRIKIALGAA KGLAFLHEGP EPVIYRDFKT SNILLDSEYN AKLSDFGLAK AGPQEGDTHV STRVVGTYGY AAPEYVRTGH LTSKSDVYSF GVVLLEILTG
301: RRSMDKKRPR GEQNLVAWAR PYLADKRKLY QIVDPRLELN YSLKGVQKVS QLAYNCLSAD PKSRPCMDEV VKVLTPLQDL NDLAILSYHS RLSQQGRRKK
401: KPDGTPQVTY NQSKSMRGSP LNTGKQHCR

Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)

001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT

Arabidopsis Description

Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.