Factsheet for VIT_08s0007g00420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	57.28	76.82
VIT_13s0019g01080.t01	Wine grape	plastid	72.1	72.28
KRG99951	Soybean	plastid	73.09	72.2
PGSC0003DMT400023009	Potato	cytosol, plastid	74.07	72.12
GSMUA_Achr8P34290_001	Banana	plastid	70.12	71.9
KRH49102	Soybean	plastid	72.59	71.71
Solyc09g010850.2.1	Tomato	cytosol, plastid	73.58	71.63
Solyc10g084770.1.1	Tomato	cytosol, plastid	72.59	71.19
PGSC0003DMT400028591	Potato	plastid	72.1	70.7
KRH75643	Soybean	plastid	71.6	70.22
GSMUA_Achr6P15230_001	Banana	plastid	65.93	69.9
KRH65832	Soybean	plastid	71.36	69.81
Solyc05g053930.2.1	Tomato	plastid	69.14	68.46
EES18885	Sorghum	plastid	67.9	67.9
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	69.14	67.15
HORVU3Hr1G115860.6	Barley	plastid	47.41	67.13
Os05t0110900-01	Rice	plasma membrane	65.43	67.09
TraesCS7B01G448200.1	Wheat	cytosol	58.27	66.67
TraesCS7D01G518500.1	Wheat	cytosol	57.78	66.67
GSMUA_Achr11P...	Banana	cytosol	61.48	66.58
TraesCS1D01G032600.1	Wheat	plastid	66.17	66.5
TraesCS4A01G096900.1	Wheat	plastid	61.23	66.49
VIT_06s0004g04810.t01	Wine grape	plastid	72.35	66.29
TraesCS1A01G031200.1	Wheat	plastid	65.93	66.25
TraesCS4B01G207500.1	Wheat	plastid	60.99	66.22
TraesCS4D01G208400.1	Wheat	plastid	60.99	66.22
Os03t0274800-01	Rice	plasma membrane	60.99	66.04
TraesCS1B01G038800.1	Wheat	plastid	65.68	65.84
Zm00001d011066_P004	Maize	plastid	66.42	64.98
EER92482	Sorghum	plastid	60.49	64.47
EER93184	Sorghum	plastid	66.42	64.35
Zm00001d034662_P001	Maize	plastid	66.42	64.2
HORVU4Hr1G059750.3	Barley	plastid	59.75	64.19
GSMUA_Achr10P...	Banana	plastid	65.43	64.16
Os03t0821900-01	Rice	plastid	66.91	63.92
GSMUA_Achr10P...	Banana	plastid	65.68	63.79
Zm00001d012958_P001	Maize	plastid	65.68	63.64
Os01t0973500-01	Rice	plasma membrane	63.95	63.48
TraesCS3D01G535700.1	Wheat	plastid	66.42	62.85
TraesCS3B01G600300.1	Wheat	plastid	66.42	62.7
TraesCS3A01G530200.1	Wheat	plastid	66.42	62.7
TraesCS5D01G493800.1	Wheat	plastid	65.43	62.35
TraesCS5B01G493500.1	Wheat	plastid	65.43	62.35
TraesCS5A01G480600.1	Wheat	plastid	65.68	61.57
GSMUA_Achr8P02170_001	Banana	plastid	57.04	61.27
Zm00001d028613_P001	Maize	plastid	61.23	61.23
HORVU5Hr1G113300.2	Barley	mitochondrion	65.19	59.19
VIT_01s0026g01880.t01	Wine grape	cytosol	61.23	59.05
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	51.11	57.82
TraesCS7B01G449500.1	Wheat	cytosol	47.16	55.04
TraesCS7A01G532700.1	Wheat	cytosol	48.89	54.55
VIT_06s0009g01810.t01	Wine grape	plastid	51.6	51.86
VIT_04s0044g00050.t01	Wine grape	plastid	38.77	51.64
TraesCS7D01G519800.1	Wheat	cytosol	46.67	51.64
VIT_03s0038g03800.t01	Wine grape	plastid	52.35	49.77
TraesCS7D01G519900.2	Wheat	plastid	49.63	49.51
VIT_14s0108g00380.t01	Wine grape	cytosol	57.78	49.26
VIT_11s0016g05720.t01	Wine grape	cytosol	50.86	48.02
VIT_01s0026g01620.t01	Wine grape	cytosol	56.54	47.61
VIT_18s0122g01270.t01	Wine grape	plastid	48.4	46.89
VIT_18s0122g01260.t01	Wine grape	plastid	50.37	45.54

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100251053	wikigene:100251053	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20
ProteinID:CBI30550	ProteinID:CBI30550.3	UniProt:D7THN4	EMBL:FN595991	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100251053	wikigene:LOC100251053	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF276	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015CA0BA	ArrayExpress:VIT_08s0007g00420
EnsemblPlantsGene:VIT_08s0007g00420	EnsemblPlants:VIT_08s0007g00420.t01	unigene:Vvi.25669	unigene:Vvi.5663	RefSeq:XP_002266032	RefSeq:XP_002266032.1
RefSeq:XP_010654281.1	RefSeq:XP_010654282.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:14724594..14728150

Molecular Weight (calculated)

45343.8 Da

IEP (calculated)

9.575

GRAVY (calculated)

-0.543

Length

405 amino acids

Sequence
(BLAST)

001: MGACCSNRIK AESPVHTGAS SKNVSKDEND LSRSSSKFSS TSIPQTPRTE GEILQASNLK SFGFSELRTA TRNFRPDSVL GEGGFGSVFK GWIDENSLMA
101: TRPGAGMVVA VKRLNQEGFQ GHREWLAEIN YLGQLQHPNL VKLIGYCLED DHRLLVYEFM PKGSMENHLF RRGSYFQPLS WSVRMEVAIG AARGLAFLHN
201: AETQVIYRDF KTSNILLDSN YNAKLSDFGL ARDGPTGDKS HVSTRVMGTY GYAAPEYLST GHLTTKSDVY SFGVVLLEML SGRRAVDKNR PSGEHNLVEW
301: AKPYLTSKRK IFRVIDTRLE GQYSLDRAQK AAMLALQCLL TEPRARPNMD EVVTALEQIC EPKDKLRSTT KEQHSNHQSR PNDRPRYHRR SADASSYPKP
401: SVAIL

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.