Factsheet for GSMUA_Achr6P15230_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 2
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	64.92	82.12
HORVU3Hr1G115860.6	Barley	plastid	56.54	75.52
Os05t0110900-01	Rice	plasma membrane	76.7	74.18
GSMUA_Achr11P...	Banana	cytosol	71.73	73.26
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	79.84	73.14
EES18885	Sorghum	plastid	77.49	73.09
TraesCS1A01G031200.1	Wheat	plastid	76.44	72.46
TraesCS1D01G032600.1	Wheat	plastid	76.44	72.46
GSMUA_Achr10P...	Banana	plastid	78.8	72.18
TraesCS1B01G038800.1	Wheat	plastid	75.92	71.78
Zm00001d011066_P004	Maize	plastid	77.49	71.5
TraesCS7D01G518500.1	Wheat	cytosol	64.92	70.66
TraesCS7B01G448200.1	Wheat	cytosol	65.44	70.62
Os03t0274800-01	Rice	plasma membrane	69.11	70.59
TraesCS4D01G208400.1	Wheat	plastid	68.85	70.51
TraesCS4A01G096900.1	Wheat	plastid	68.59	70.24
HORVU4Hr1G059750.3	Barley	plastid	69.11	70.03
TraesCS4B01G207500.1	Wheat	plastid	68.32	69.97
Os01t0973500-01	Rice	plasma membrane	74.61	69.85
GSMUA_Achr10P...	Banana	plastid	75.13	69.49
EER92482	Sorghum	plastid	68.85	69.21
TraesCS3A01G530200.1	Wheat	plastid	76.44	68.07
KRH73031	Soybean	plastid	69.63	67.86
VIT_13s0019g01080.t01	Wine grape	plastid	71.73	67.82
TraesCS3D01G535700.1	Wheat	plastid	75.92	67.76
TraesCS3B01G600300.1	Wheat	plastid	75.92	67.6
GSMUA_Achr8P34290_001	Banana	plastid	69.9	67.59
GSMUA_Achr8P02170_001	Banana	plastid	66.23	67.11
KRH15105	Soybean	cytosol, nucleus	66.75	66.93
KRG97912	Soybean	cytosol	67.28	66.58
VIT_08s0007g00420.t01	Wine grape	plastid	69.9	65.93
Zm00001d028613_P001	Maize	plastid	67.54	63.7
KRG99951	Soybean	plastid	68.32	63.66
Solyc04g011520.2.1	Tomato	nucleus	65.44	63.45
KRH49102	Soybean	plastid	68.06	63.41
PGSC0003DMT400071329	Potato	plastid	64.92	62.94
Solyc10g084770.1.1	Tomato	cytosol, plastid	67.8	62.71
PGSC0003DMT400028591	Potato	plastid	67.54	62.47
PGSC0003DMT400023009	Potato	cytosol, plastid	67.54	62.02
KRH75643	Soybean	plastid	67.02	61.99
Solyc09g010850.2.1	Tomato	cytosol, plastid	67.28	61.78
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	57.33	61.17
Solyc05g053930.2.1	Tomato	plastid	65.18	60.88
KRH65832	Soybean	plastid	65.97	60.87
TraesCS7B01G449500.1	Wheat	cytosol	53.66	59.08
TraesCS7A01G532700.1	Wheat	cytosol	56.02	58.95
KRH15106	Soybean	cytosol	2.62	58.82
GSMUA_Achr4P04920_001	Banana	plastid	55.5	54.92
TraesCS7D01G519800.1	Wheat	cytosol	52.36	54.64
GSMUA_Achr10P...	Banana	plastid	53.93	52.69
GSMUA_Achr6P08550_001	Banana	plastid	53.14	52.05
GSMUA_Achr1P21600_001	Banana	plastid	55.5	51.33
TraesCS7D01G519900.2	Wheat	plastid	54.45	51.23
GSMUA_AchrUn_...	Banana	plastid	58.12	51.03
GSMUA_Achr3P14810_001	Banana	plastid	55.24	50.84
GSMUA_Achr2P07470_001	Banana	plastid	54.97	50.48
GSMUA_Achr3P26960_001	Banana	plastid	49.74	49.87
GSMUA_Achr2P11330_001	Banana	cytosol	45.29	49.71
GSMUA_Achr1P18020_001	Banana	plastid	55.76	49.65
GSMUA_Achr6P10640_001	Banana	plastid	52.09	49.26
GSMUA_Achr3P26530_001	Banana	plasma membrane	52.09	49.01
GSMUA_Achr10P...	Banana	cytosol	59.42	39.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G15230_001	EnsemblPlants:GSMUA_Achr6P15230_001	EnsemblPlants:GSMUA_Achr6T15230_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0T771	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF511	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002948DFD	SEG:seg	:	:	:

Description

Protein kinase APK1A, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G15230_001]

Coordinates

chr6:-:10135143..10138558

Molecular Weight (calculated)

42190.3 Da

IEP (calculated)

10.184

GRAVY (calculated)

-0.376

Length

382 amino acids

Sequence
(BLAST)

001: MGNCWGAKIK AESPSHSAFA SGTNSKYGSR EGKAFSSSSS KVSVPPTPRS EDEILQSSNV KSFTFSELKT ATRNFRPDSV LGEGGFGSVF KGWVDEHTFA
101: PTKPGTGMVI AVKKLNQDGH QGHREWLAEV NYLGQLSHPN LVRLIGYCLE DEQRLLVYEF MQRGSLENHL FRRSSTVQPL SWNIRMRVAL GAAKGLAFLH
201: SDKAKVIYRD FKASNVLLDS NYNAKLSDFG LAKDGPTGDK SHVSTRVMGT HGYAAPEYLA TGHLTTKSDV YSFGVVLLEL LSGRRALDRN RPIGEHNLVE
301: WARPFLASKR KIFRVLDTRL GAQYPLATAQ KASFIALQCL STEARHRPAM AQVVSALEEL QNAEKLGTER LHIPGRRLPL ST

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.