Factsheet for GSMUA_Achr3P26530_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	66.5	62.07
PGSC0003DMT400003582	Potato	cytosol	51.23	58.59
GSMUA_Achr8P34290_001	Banana	plastid	51.48	52.91
GSMUA_Achr6P15230_001	Banana	plastid	49.01	52.09
GSMUA_Achr11P...	Banana	cytosol	46.55	50.53
Solyc02g087830.2.1	Tomato	plastid	50.74	50.49
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	51.23	49.88
GSMUA_Achr10P...	Banana	plastid	50.49	49.64
GSMUA_Achr4P04920_001	Banana	plastid	46.06	48.45
GSMUA_Achr8P02170_001	Banana	plastid	44.83	48.28
GSMUA_Achr10P...	Banana	plastid	49.51	48.2
GSMUA_Achr1P21600_001	Banana	plastid	48.28	47.46
GSMUA_Achr2P07470_001	Banana	plastid	47.54	46.39
GSMUA_Achr3P14810_001	Banana	plastid	46.31	45.3
GSMUA_Achr2P11330_001	Banana	cytosol	37.93	44.25
GSMUA_Achr1P18020_001	Banana	plastid	46.55	44.06
GSMUA_Achr10P...	Banana	plastid	41.87	43.48
GSMUA_Achr3P26960_001	Banana	plastid	39.9	42.52
GSMUA_Achr6P08550_001	Banana	plastid	39.9	41.54
OQU78536	Sorghum	plasma membrane	62.07	41.24
GSMUA_Achr6P10640_001	Banana	plastid	40.89	41.09
GSMUA_Achr10P...	Banana	cytosol	47.04	33.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr3G26530_001	EnsemblPlants:GSMUA_Achr3P26530_001	EnsemblPlants:GSMUA_Achr3T26530_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SI19
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF507	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294B1FD	:	:	:	:	:

Description

Protein kinase APK1B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G26530_001]

Coordinates

chr3:+:26348928..26353346

Molecular Weight (calculated)

45933.3 Da

IEP (calculated)

10.109

GRAVY (calculated)

-0.409

Length

406 amino acids

Sequence
(BLAST)

001: MFLFRQVKDV LLWSFLRAFE QVLTDLIFTF KELKSATSNF QPDGLLGEGG FGRVYKGWIE EYGTAPVKPG TGLTVAVKML SHDRIQGHKE WLAEVNLLGD
101: VRHPNLVKLI GYCIEDDQRL LVYEFMQRGN LENHLFRRSR DLPWSIRMKI ALGAAKGLAF LHEEAERRVI YRDFKTSNIL LDADFNAKLS DFGLAKAGPE
201: GDKTHVTTRV MGTYGYAAPE YVMTGHLTTR SDVYSFGVVL LEIMTGRRTM DKRRPAGEQN LVEWARPYLG NKRQFYRIID PRLHGNFSVK GAQKVAQLVQ
301: ACVGRNAKAR PLMSEVVEVL KPLVDLNDIA SSSSSFRAMT KERAASIAAS HPIECNAQQP KRSSISRGSS PYPHPMRSLS HGRVDRREER ESDKQPFDRP
401: GFSGRP

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.