Factsheet for PGSC0003DMT400003582

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g087830.2.1	Tomato	plastid	92.68	80.64
PGSC0003DMT400095910	Potato	cytosol	47.89	51.67
GSMUA_Achr3P26530_001	Banana	plasma membrane	58.59	51.23
PGSC0003DMT400011261	Potato	plastid	53.8	47.63
PGSC0003DMT400045429	Potato	cytosol	63.94	47.59
PGSC0003DMT400002229	Potato	cytosol	63.66	46.89
PGSC0003DMT400071329	Potato	plastid	51.83	46.7
PGSC0003DMT400028591	Potato	plastid	54.08	46.49
PGSC0003DMT400002280	Potato	plastid	53.8	45.58
PGSC0003DMT400023009	Potato	cytosol, plastid	52.96	45.19
PGSC0003DMT400082362	Potato	plastid	50.14	44.95
PGSC0003DMT400065801	Potato	plastid	52.68	44.52
PGSC0003DMT400079361	Potato	cytosol	56.9	42.17
PGSC0003DMT400045075	Potato	plastid	47.32	40.48
PGSC0003DMT400025864	Potato	plastid	47.32	40.29
PGSC0003DMT400048049	Potato	plastid	46.48	39.86
PGSC0003DMT400038068	Potato	plastid	46.76	39.71
PGSC0003DMT400049853	Potato	plasma membrane	49.01	36.1
OQU78536	Sorghum	plasma membrane	60.85	35.35

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102604453	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZLY6	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400001416	PGSC:PGSC0003DMG400001416
EnsemblPlants:PGSC0003DMT400003582	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF483
InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294BC26	RefSeq:XP_006338780.1

Description

Protein kinase APK1B, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400001416]

Coordinates

chr2:+:46356285..46357713

Molecular Weight (calculated)

40159.6 Da

IEP (calculated)

10.104

GRAVY (calculated)

-0.421

Length

355 amino acids

Sequence
(BLAST)

001: MVQEIASQPR KFCFNELRLA TRNFRREDLL GMGGFGPVYK GWINESGTPP VKPGTGLAVA VKILNRYGVQ GHREWLAEVH FLRNLHHQNL VKLVGYCMEG
101: HQRLIVYEFM ARGSLENHLF RSMVLPWCTR IRIALGAAQG LAYLHEEAQK PVIYRDFKAS NILLDADYNA KLSDFGLARD GPEGDQTHVS TRVMGTYGYA
201: APEYVMTGHL TMKSDVYSFG VVLLEILSGR KAMDKSQRMG EHNLVSWAKP YLGDKHHFWR IIDTRLRGKF SKKGALKCTE IASLCLRKNP KLRPQMSEIV
301: EMLMRLPSTS EFRDADDNSK DKHVAGNLYS PTGPNASPSS YTLSNKQKGK RPVRS

Best Arabidopsis Sequence Match ( AT3G28690.1 )
(BLAST)

001: MSGELKYSSK LRIFMFNDLK LATRNFRPES LLGEGGFGCV FKGWIEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INFLGNLVHP SLVKLVGYCM
101: EEDQRLLVYE FMPRGSLENH LFRRTLPLPW SVRMKIALGA AKGLAFLHEE AEKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEKKS HVSTRVMGTY
201: GYAAPEYVMT GHLTTKSDVY SFGVVLLEIL TGRRSVDKSR PNGEQNLVEW VRPHLLDKKR FYRLLDPRLE GHYSIKGAQK ATQVAAQCLN RDSKARPKMS
301: EVVEALKPLP NLKDFASSSS SFQTMQPVAK NGVRTQGGGF VSRNGPPMRS LSSLNLPQAS PYRYARQSPK PKGKEP

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0D2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.