Factsheet for PGSC0003DMT400002229

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400019556
PGSC0003DMT400046670
PGSC0003DMT400063083
PGSC0003DMT400069639

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01300.1	PGSC0003DMT400063083	AT5G61010.1	21798944
AT5G15080.1	PGSC0003DMT400019556	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400046670	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400069639	AT4G24690.1	21798944
AT5G15080.1	PGSC0003DMT400063083	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g010780.2.1	Tomato	cytosol	98.34	98.54
PGSC0003DMT400045429	Potato	cytosol	92.12	93.08
VIT_01s0026g01620.t01	Wine grape	cytosol	88.38	88.57
KRG99168	Soybean	nucleus	86.72	85.83
KRH45845	Soybean	nucleus	86.51	85.63
KRH74775	Soybean	cytosol	86.72	85.13
Os09t0361100-01	Rice	cytosol, plasma membrane	67.63	84.9
GSMUA_AchrUn_...	Banana	plastid	74.9	82.99
KRH69360	Soybean	cytosol	85.89	81.5
KRH01126	Soybean	cytosol	74.9	76.16
KRH40135	Soybean	cytosol	74.48	75.74
TraesCS3B01G241300.1	Wheat	cytosol	74.48	75.26
AT5G15080.1	Thale cress	cytosol	76.97	75.25
TraesCS3D01G213600.1	Wheat	cytosol	73.86	74.63
TraesCS3A01G210700.1	Wheat	cytosol	73.86	74.63
HORVU3Hr1G051080.3	Barley	cytosol	74.48	73.42
KRG93494	Soybean	cytosol	73.44	72.69
Os01t0588500-01	Rice	plasma membrane	74.48	72.67
EER96629	Sorghum	cytosol	75.52	72.65
Bra039129.1-P	Field mustard	nucleus	73.24	72.63
Bra040508.1-P	Field mustard	nucleus	73.03	72.58
CDY49042	Canola	cytosol	72.61	72.46
AT3G01300.1	Thale cress	nucleus	73.65	72.45
CDX78606	Canola	nucleus	75.73	72.42
Bra006278.1-P	Field mustard	nucleus	75.73	72.42
CDY37534	Canola	nucleus	73.24	72.34
TraesCS5A01G193300.2	Wheat	cytosol	74.69	72.14
TraesCS5D01G195800.2	Wheat	cytosol	74.69	72.14
CDY59664	Canola	cytosol	71.58	72.03
CDX70589	Canola	nucleus	75.31	72.02
EES03187	Sorghum	cytosol	73.44	71.95
CDY28689	Canola	nucleus	72.61	71.87
Zm00001d020213_P003	Maize	cytosol	75.1	71.83
Zm00001d005647_P002	Maize	cytosol	73.86	70.36
AT3G28690.2	Thale cress	cytosol	69.09	69.96
Zm00001d044324_P001	Maize	cytosol	72.82	69.92
Bra033053.1-P	Field mustard	cytosol	68.05	69.64
TraesCS5B01G188700.1	Wheat	cytosol	74.48	69.57
CDY47249	Canola	cytosol	67.63	69.21
CDY04026	Canola	cytosol	67.43	68.57
HORVU5Hr1G056920.1	Barley	cytosol	74.48	68.51
PGSC0003DMT400003582	Potato	cytosol	46.89	63.66
PGSC0003DMT400011261	Potato	plastid	49.38	59.35
PGSC0003DMT400071329	Potato	plastid	46.06	56.35
PGSC0003DMT400095910	Potato	cytosol	37.76	55.32
PGSC0003DMT400079361	Potato	cytosol	54.77	55.11
PGSC0003DMT400028591	Potato	plastid	46.47	54.24
PGSC0003DMT400002280	Potato	plastid	46.47	53.46
PGSC0003DMT400023009	Potato	cytosol, plastid	46.06	53.37
PGSC0003DMT400082362	Potato	plastid	43.15	52.53
PGSC0003DMT400065801	Potato	plastid	45.23	51.9
PGSC0003DMT400045075	Potato	plastid	41.08	47.71
PGSC0003DMT400048049	Potato	plastid	40.87	47.58
PGSC0003DMT400038068	Potato	plastid	41.08	47.37
PGSC0003DMT400025864	Potato	plastid	38.8	44.84
CDY00122	Canola	cytosol	65.98	43.27
Bra039049.1-P	Field mustard	cytosol	64.11	39.56
PGSC0003DMT400049853	Potato	plasma membrane	38.38	38.38
Bra008726.1-P	Field mustard	cytosol	74.27	22.64
CDY65043	Canola	cytosol	73.03	22.26

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102602801	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZJT3	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400000856
PGSC:PGSC0003DMG400000856	EnsemblPlants:PGSC0003DMT400002229	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF507	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294AD41	RefSeq:XP_006363918.1	SEG:seg	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400000856]

Coordinates

chr1:-:13664019..13671420

Molecular Weight (calculated)

53604.7 Da

IEP (calculated)

9.462

GRAVY (calculated)

-0.584

Length

482 amino acids

Sequence
(BLAST)

001: MGLGGDGVKG ESWDVEKSKG RKKKEGDEEE TGCWMKLRFI SSCISSRSKV DNSISGISTR CESKSTNDTS IDQPVAPIIS STTTSNAESN SSTSKLEEEL
101: KVFSQLRKFT FNDLKLATRN FRPESLLGEG GFGCVFKGWI EENGTAPVKP GTGLTVAVKT LNHDGLQGHK EWLAEVNFLG DLIHPNLVKL IGYCIEDDQR
201: LLVYEFMPRG SLENHLFRRS LPLPWSIRMK IALGAAKGLA FLHEEAERPV IYRDFKTSNI LLDADYNAKL SDFGLAKDAP EGDKTHVSTR VMGTYGYAAP
301: EYVMTGHLTS KSDVYSFGVV LLEMMTGRRS MDKNRPNGEH NLVEWARPHL GERRRFYKLI DPRLEGHFSI KGAQKAAQLA ARCLSRDPKV RPMMSDVVEA
401: LKPLPNLKDM ASSSYYFQTM QADRVGSSPS PNTRNVLRTQ GSFSRNGQQQ QQPRSLSIPN GAHASPYRHQ LSQNSPNPNG KP

Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)

001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT

Arabidopsis Description

PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.