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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX92969
CDX94878
CDY02176
CDY23090
CDY35484
CDY40829

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G01300.1 CDX92969 AT3G22960.1 21798944
AT3G01300.1 CDX94878 AT3G22960.1 21798944
AT3G01300.1 CDY35484 AT3G22960.1 21798944
AT3G01300.1 CDY40829 AT3G22960.1 21798944
AT3G01300.1 CDY02176 AT5G61010.1 21798944
AT3G01300.1 CDY23090 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039129.1-P Field mustard nucleus 98.34 97.74
CDY37534 Canola nucleus 98.34 97.34
CDY28689 Canola nucleus 91.51 90.76
AT3G01300.1 Thale cress nucleus 89.86 88.57
CDX70589 Canola nucleus 85.3 81.75
CDX78606 Canola nucleus 84.89 81.35
CDY59664 Canola cytosol 77.64 78.29
Os09t0361100-01 Rice cytosol, plasma membrane 59.63 75.0
GSMUA_AchrUn_... Banana plastid 66.87 74.25
Solyc05g007050.2.1 Tomato cytosol 72.67 73.43
PGSC0003DMT400045429 Potato cytosol 72.26 73.17
PGSC0003DMT400002229 Potato cytosol 72.46 72.61
Solyc01g010780.2.1 Tomato cytosol 71.64 71.93
CDY47249 Canola cytosol 67.29 69.0
CDY04026 Canola cytosol 66.87 68.14
KRH40135 Soybean cytosol 66.46 67.72
KRH01126 Soybean cytosol 66.46 67.72
TraesCS3B01G241300.1 Wheat cytosol 65.42 66.25
TraesCS3A01G210700.1 Wheat cytosol 65.22 66.04
TraesCS3D01G213600.1 Wheat cytosol 65.01 65.83
KRG93494 Soybean cytosol 65.63 65.09
Os01t0588500-01 Rice plasma membrane 66.46 64.98
HORVU3Hr1G051080.3 Barley cytosol 65.42 64.62
TraesCS5D01G195800.2 Wheat cytosol 66.46 64.33
TraesCS5A01G193300.2 Wheat cytosol 66.46 64.33
EES03187 Sorghum cytosol 65.42 64.23
EER96629 Sorghum cytosol 65.84 63.47
Zm00001d044324_P001 Maize cytosol 65.63 63.15
Zm00001d020213_P003 Maize cytosol 65.42 62.7
TraesCS5B01G188700.1 Wheat cytosol 66.25 62.02
Zm00001d005647_P002 Maize cytosol 64.6 61.66
HORVU5Hr1G056920.1 Barley cytosol 66.46 61.26
CDY10453 Canola plastid 44.72 55.38
CDY40347 Canola plastid 44.1 54.62
CDY48100 Canola plastid 43.48 54.12
CDY04848 Canola plastid 43.06 53.61
CDY09904 Canola plastid 44.93 53.45
CDY06715 Canola plastid 45.13 53.43
CDY06271 Canola plastid 44.72 53.2
CDX95143 Canola plastid 44.93 53.19
CDY02940 Canola cytosol 38.51 53.14
CDY55560 Canola plastid 42.86 52.94
CDX80814 Canola plastid 42.86 52.94
CDX76093 Canola cytosol, plastid 38.1 52.57
CDX93249 Canola plastid 41.61 52.48
CDY39519 Canola cytosol 42.86 52.27
CDY07022 Canola plastid 41.2 52.23
CDY31741 Canola cytosol, plastid 45.13 52.15
CDX77220 Canola cytosol, plastid 45.13 52.15
CDY47885 Canola plastid 44.1 51.57
CDY45196 Canola plastid 45.55 51.52
CDX74847 Canola cytosol 40.58 51.31
CDY20465 Canola cytosol 40.99 51.3
CDX83305 Canola plastid 42.44 50.74
CDY52768 Canola plastid 41.61 50.5
CDX95754 Canola plastid 42.24 50.49
CDY49086 Canola cytosol, plastid 43.69 50.24
CDY24954 Canola plastid 40.79 50.13
CDY07643 Canola plastid 40.79 50.13
CDY53554 Canola plastid 44.51 50.12
CDX81634 Canola plastid 44.51 50.12
CDY38760 Canola plastid 40.79 50.0
CDY03036 Canola plastid 45.55 49.77
CDY11655 Canola plastid 40.58 49.75
CDY40221 Canola plastid 39.54 49.74
CDY39318 Canola cytosol, plastid 43.27 49.64
CDY41675 Canola plastid 45.34 49.32
CDY67404 Canola plastid 45.34 49.21
CDY46426 Canola plastid 41.61 49.02
CDX71350 Canola plastid 39.75 46.83
CDY31372 Canola plastid 39.75 46.83
CDY47489 Canola plastid 39.54 46.36
CDY26797 Canola plastid 39.54 45.91
CDY40618 Canola plastid 36.44 45.24
CDX69153 Canola plastid 38.92 43.72
CDX72550 Canola plastid 35.4 43.62
CDY24815 Canola plastid 38.1 43.6
CDY41645 Canola plastid 38.1 43.6
CDY00122 Canola cytosol 65.84 43.27
CDX75515 Canola plastid 38.1 43.09
CDX72549 Canola plastid 38.3 42.53
CDY24816 Canola cytosol, plastid 32.09 42.23
CDY40619 Canola plastid 37.89 42.07
CDX85943 Canola plastid 37.47 41.23
CDX68102 Canola plastid 37.47 40.86
CDX87609 Canola cytosol 37.68 40.53
CDX88265 Canola cytosol 37.27 40.36
CDY65043 Canola cytosol 78.88 24.1
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078IGF9UniProt:A0A078IGF9EnsemblPlants:CDY49042
ProteinID:CDY49042ProteinID:CDY49042.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00092261001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714PIRSF:PIRSF000615ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF266InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF12ECSEG:seg:
Description
BnaC05g48700DBnaC05g48700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGF9]
Coordinates
chrLK032808:-:4397..6904
Molecular Weight (calculated)
53373.0 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.425
Length
483 amino acids
Sequence
(BLAST)
001: MSLDSVKVME KSNKSNESEK RKKQKKNNVR NSEGEEANGC WVKFRVMVCC LPSTTDVDSS SPTLSTTTLG SKSVATVKSN EQPAGPVSSS TTATSNAESS
101: LSTPMISEEL KIYSHLKQFS FLDLKLATRN FRPESLLGEG GFGCVFKGWV EENGTAPVKP GTGLTVAVKT LNLDGLQGHK EWLAEINYLG NLLHPNLVKL
201: VGYCIEDDQR LLVYEFMPRG SLENHLFRRS LPLPWSIRMR IALGAAKGLS FLHEEALKPV IYRDFKTSNI LLDSDYNAKL SDFGLAKDAP DEGKTHVSTR
301: VMGTYGYAAP EYVMTGHLTS MSDVYSFGVV LLEMLTGRRS MDKNRPSGEQ NLVEWARPHL LDRRRFYRLL DPRLEGHFSI KGAQKVTQLA AQCLSRDSKI
401: RPKMSEVVEV LKPLPLLKDM ASSSYYFQTM QAERLKAGSG SGRGLGSRNG QPVLRTLSSP HGQAGSSPYR HQIPSPMPKG ATT
Best Arabidopsis Sequence Match ( AT3G01300.1 )
(BLAST)
001: MGFDSVKVME NWQSKTSNEN EKKKKKRRRK KNNNVRNSEH YEEEANGCWV KFRYIVCCAS STSDVETSLT LSTSTVGSQS AIVQSNDQPV GPVSSTTTTS
101: NAESSLSTPI ISEELNIYSH LKKFSFIDLK LATRNFRPES LLGEGGFGCV FKGWVEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE INYLGNLLHP
201: NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIALGA AKGLSFLHEE ALKPVIYRDF KTSNILLDGE YNAKLSDFGL AKDAPDEGKT
301: HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSVKGAQK VTQLAAQCLS
401: RDSKIRPKMS EVVEVLKPLP HLKDMASASY YFQTMQAERL KAGSGSGSGR GFGSRNGQPV FRTLSSPHGQ AGSSPYRHQI PSPKPKGATT
Arabidopsis Description
Receptor-like serine/threonine-protein kinase At3g01300 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRH7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.