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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 4
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46426 Canola plastid 97.99 95.12
AT1G26970.1 Thale cress plastid 82.66 79.85
CDY11655 Canola plastid 75.38 76.14
CDY38760 Canola plastid 75.38 76.14
CDY45196 Canola plastid 67.09 62.53
CDY39318 Canola cytosol, plastid 65.33 61.76
CDY49086 Canola cytosol, plastid 64.32 60.95
CDY41675 Canola plastid 67.84 60.81
GSMUA_Achr1P21600_001 Banana plastid 63.07 60.77
CDY03036 Canola plastid 67.34 60.63
CDY67404 Canola plastid 67.59 60.45
CDX81634 Canola plastid 64.57 59.91
CDY53554 Canola plastid 64.57 59.91
KRH56930 Soybean cytosol 59.8 59.5
EER92783 Sorghum plastid 65.08 59.0
HORVU4Hr1G075150.2 Barley plastid 61.56 58.75
TraesCS4A01G016800.1 Wheat plastid 62.06 58.67
TraesCS4B01G287300.1 Wheat plastid 62.06 58.67
TraesCS4D01G286100.1 Wheat plastid 62.06 58.67
Os10t0405100-02 Rice plasma membrane 63.07 58.64
GSMUA_Achr2P07470_001 Banana plastid 61.06 58.41
Zm00001d033004_P004 Maize plastid 63.57 58.03
EER94269 Sorghum plastid 63.07 57.97
CDY02940 Canola cytosol 50.0 56.86
CDX76093 Canola cytosol, plastid 49.75 56.57
Zm00001d048314_P001 Maize cytosol, plastid 64.57 56.36
GSMUA_Achr6P10640_001 Banana plastid 56.78 55.94
CDY06271 Canola plastid 56.28 55.17
CDY09904 Canola plastid 55.53 54.43
CDY06715 Canola plastid 55.53 54.17
CDY10453 Canola plastid 53.02 54.1
CDY40347 Canola plastid 53.02 54.1
CDX95143 Canola plastid 55.03 53.68
Solyc12g077390.1.1 Tomato cytosol 56.28 53.46
CDY55560 Canola plastid 52.26 53.2
CDX80814 Canola plastid 52.26 53.2
CDY40221 Canola plastid 51.01 52.86
CDY48100 Canola plastid 51.51 52.84
CDY04848 Canola plastid 51.01 52.32
CDY31741 Canola cytosol, plastid 54.52 51.91
CDX77220 Canola cytosol, plastid 54.52 51.91
CDX74847 Canola cytosol 49.75 51.83
CDY20465 Canola cytosol 50.0 51.55
CDY39519 Canola cytosol 50.5 50.76
CDY07022 Canola plastid 48.49 50.66
CDX93249 Canola plastid 48.74 50.65
CDY24954 Canola plastid 50.0 50.64
CDY07643 Canola plastid 49.75 50.38
CDY47885 Canola plastid 52.26 50.36
CDX83305 Canola plastid 50.5 49.75
CDX95754 Canola plastid 50.5 49.75
GSMUA_Achr10P... Banana cytosol 65.08 45.52
CDY40618 Canola plastid 43.72 44.73
CDY31372 Canola plastid 45.98 44.63
CDY47489 Canola plastid 45.98 44.42
CDX71350 Canola plastid 45.73 44.39
CDY41645 Canola plastid 46.73 44.08
PGSC0003DMT400049853 Potato plasma membrane 53.02 43.78
CDY26797 Canola plastid 45.73 43.75
CDX72550 Canola plastid 42.96 43.62
CDY24815 Canola plastid 46.23 43.6
CDY47249 Canola cytosol 51.01 43.1
CDX69153 Canola plastid 46.48 43.02
CDX72549 Canola plastid 46.73 42.76
CDX75515 Canola plastid 45.73 42.62
CDY04026 Canola cytosol 50.75 42.62
CDY40619 Canola plastid 45.98 42.07
CDY59664 Canola cytosol 50.25 41.75
CDY24816 Canola cytosol, plastid 38.44 41.69
CDX85943 Canola plastid 45.98 41.69
CDY49042 Canola cytosol 50.5 41.61
CDY37534 Canola nucleus 50.5 41.19
CDY28689 Canola nucleus 50.25 41.07
CDX68102 Canola plastid 45.48 40.86
CDX87609 Canola cytosol 45.48 40.31
CDX78606 Canola nucleus 51.01 40.28
CDX88265 Canola cytosol 44.97 40.13
CDX70589 Canola nucleus 50.75 40.08
CDY00122 Canola cytosol 50.5 27.35
CDY65043 Canola cytosol 50.5 12.71
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078IUS2UniProt:A0A078IUS2EnsemblPlants:CDY52768
ProteinID:CDY52768ProteinID:CDY52768.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00007812001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF07714PIRSF:PIRSF000654ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF160InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI0004EBE35E:::
Description
BnaC08g48570DBnaC08g48570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUS2]
Coordinates
chrLK033127:+:46635..48668
Molecular Weight (calculated)
44064.8 Da
IEP (calculated)
10.066
GRAVY (calculated)
-0.419
Length
398 amino acids
Sequence
(BLAST)
001: MGNCFGSSAK VDSRESPYCG SSRIYAKPSQ SSRLSSLTIP PPSYSDDRSS TSLPTPRSEG VLLASPTLKA FTFNDLKTAT RNFRPDSVIG EGGFGYVYKG
101: WINERTLTPS KPGSGIVVAV KKLKDDTPQG HKEWLAEVDY LGRLHHMNLV KLIGYCLKGD YIRLLVYEYM PKGSLESHLF RRGAEPIPWK TRMKVAISAA
201: RGLAFLHDAQ VIYRDFKASN ILLDSDFNAK LSDFGLAREG PKGDRTHVST QVMGTHGYAA PEYVSTGRIT TKSDVYSFGV VLLELLSGRP TVDQSKVGVE
301: RNLVDWAIPY LGADRRKVFR IMDTKLEGQY PHKGACLAAN IALQCLNQEA KLRPNMSDVL STLEELQMKS STSKTEKRRV KAPGASPVVT RRRGPHDR
Best Arabidopsis Sequence Match ( AT1G26970.1 )
(BLAST)
001: MGNCFGFSAK VGNRESPYRG SSRISAKRSQ SSRLSSLTIQ SSSYNDDTSV ASLQTPRSEG ELLASPTLKA FTFNELKTAT RNFRPDSVIG EGGFGYVYKG
101: WIDERTLSPS KPGSGMVVAV KKLKEEGFQG HRQWLAEVDC LGRLHHMNLV KLIGYCSKGD HIRLLVYEYM PKGSLENHLF RRGAEPIPWR TRIKVAIGAA
201: RGLAFLHEAQ VIYRDFKASN ILLDSEFNAK LSDFGLAKVG PTGDRTHVST QVMGTQGYAA PEYVATGRIT AKSDVYSFGV VLLELLSGRL TVDKTKVGVE
301: RNLVDWAIPY LGDKRKVFRI MDTKLGGQYP HKGACLTANT ALQCLNQEPK LRPKMSDVLS TLEELEMTLK SGSISNSVMK LTSSSSSFTA KQRVRTPVAD
401: PVLSSRRCRR VR
Arabidopsis Description
PBL4Probable serine/threonine-protein kinase PBL4 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP29]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.