CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31372	Canola	plastid	99.51	99.51
Bra002031.1-P	Field mustard	plastid	99.27	99.27
CDY47489	Canola	plastid	91.22	90.78
CDY26797	Canola	plastid	91.22	89.9
AT2G17220.1	Thale cress	plastid	87.56	86.72
KRH14015	Soybean	plastid	67.8	67.48
KRH74099	Soybean	plastid	67.56	67.23
Solyc01g112220.2.1	Tomato	plastid	66.1	66.1
PGSC0003DMT400038068	Potato	plastid	66.1	64.83
VIT_03s0038g03800.t01	Wine grape	plastid	66.83	64.32
GSMUA_Achr4P04920_001	Banana	plastid	57.32	60.88
GSMUA_Achr3P14810_001	Banana	plastid	60.24	59.52
TraesCS7B01G473700.1	Wheat	plastid	58.29	58.01
Os02t0118200-01	Rice	plasma membrane	59.76	57.38
TraesCSU01G105900.1	Wheat	plastid	58.05	57.21
GSMUA_Achr1P18020_001	Banana	plastid	59.76	57.11
Os06t0727400-01	Rice	plasma membrane	57.56	57.0
TraesCS7A01G550300.1	Wheat	plastid	57.8	56.97
TraesCS2D01G038200.1	Wheat	cytosol	53.9	56.81
Zm00001d054014_P002	Maize	cytosol, plastid	59.02	56.28
HORVU6Hr1G010050.1	Barley	plastid	59.76	56.19
TraesCS6B01G069800.1	Wheat	plastid	59.76	56.19
TraesCSU01G111800.1	Wheat	plastid	59.76	56.19
EER95575	Sorghum	cytosol	53.41	56.15
GSMUA_Achr3P26960_001	Banana	plastid	51.95	55.91
TraesCS6A01G052100.2	Wheat	plastid	59.27	55.86
EES04370	Sorghum	plastid	59.02	55.5
EER90433	Sorghum	plastid	56.34	55.13
Zm00001d014850_P002	Maize	plastid	54.63	54.24
Zm00001d048342_P001	Maize	plastid	53.9	54.17
TraesCS2B01G422500.1	Wheat	cytosol	59.02	53.42
TraesCS2A01G404600.1	Wheat	cytosol	59.51	53.39
TraesCS2D01G401500.2	Wheat	cytosol	59.51	53.39
TraesCS2A01G039600.1	Wheat	cytosol	54.88	53.32
Zm00001d015012_P001	Maize	plastid	58.78	53.2
Zm00001d026126_P001	Maize	plastid	59.02	53.07
TraesCS6D01G235300.1	Wheat	cytosol	56.59	52.97
KXG26902	Sorghum	cytosol	59.27	52.71
GSMUA_Achr2P11330_001	Banana	cytosol	44.15	52.01
CDY06715	Canola	plastid	51.71	51.96
HORVU6Hr1G064690.4	Barley	cytosol	57.56	51.75
CDX95143	Canola	plastid	51.46	51.72
CDY09904	Canola	plastid	50.98	51.48
TraesCS6A01G253700.1	Wheat	cytosol	56.83	51.43
HORVU6Hr1G009900.9	Barley	mitochondrion	41.95	51.34
CDY40618	Canola	plastid	48.54	51.16
CDY06271	Canola	plastid	50.49	50.99
Os02t0670100-00	Rice	cytosol, plasma membrane	57.32	50.87
CDY48100	Canola	plastid	48.05	50.77
TraesCS6B01G271700.1	Wheat	cytosol	56.83	50.65
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	51.71	50.6
CDY04848	Canola	plastid	47.8	50.52
CDY40347	Canola	plastid	48.05	50.51
CDX72550	Canola	plastid	48.29	50.51
CDX76093	Canola	cytosol, plastid	42.93	50.29
CDY02940	Canola	cytosol	42.93	50.29
CDY10453	Canola	plastid	47.56	50.0
CDY47885	Canola	plastid	50.24	49.88
CDY39519	Canola	cytosol	48.05	49.75
TraesCS6A01G051600.1	Wheat	cytosol	45.37	49.6
Os04t0563900-00	Rice	plasma membrane	57.32	49.47
EES05745	Sorghum	cytosol	57.07	49.47
CDY55560	Canola	plastid	47.07	49.36
CDX77220	Canola	cytosol, plastid	50.24	49.28
CDY31741	Canola	cytosol, plastid	50.24	49.28
CDX80814	Canola	plastid	46.83	49.1
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	44.88	49.07
CDX83305	Canola	plastid	48.29	49.01
CDX95754	Canola	plastid	48.29	49.01
TraesCS6B01G069300.1	Wheat	cytosol	44.63	48.67
CDY24816	Canola	cytosol, plastid	43.41	48.5
CDY40221	Canola	plastid	45.37	48.44
Zm00001d051424_P001	Maize	plastid	52.68	48.43
CDX93249	Canola	plastid	45.12	48.3
CDY07022	Canola	plastid	44.88	48.29
Zm00001d027509_P002	Maize	cytosol	44.15	48.27
CDX75515	Canola	plastid	50.0	48.01
CDX69153	Canola	plastid	50.24	47.91
CDY24815	Canola	plastid	49.27	47.87
CDY41645	Canola	plastid	49.27	47.87
CDX74847	Canola	cytosol	44.39	47.64
HORVU7Hr1G121690.5	Barley	plastid	57.56	47.48
CDY07643	Canola	plastid	45.37	47.33
CDY24954	Canola	plastid	45.37	47.33
CDY20465	Canola	cytosol	44.39	47.15
TraesCSU01G110700.2	Wheat	cytosol	43.17	47.07
CDY11655	Canola	plastid	45.12	46.95
CDY38760	Canola	plastid	45.12	46.95
CDY40619	Canola	plastid	49.76	46.9
CDX85943	Canola	plastid	50.0	46.7
CDX72549	Canola	plastid	49.51	46.67
CDY39318	Canola	cytosol, plastid	47.8	46.56
TraesCS2B01G052500.1	Wheat	cytosol	52.44	46.54
CDX68102	Canola	plastid	50.0	46.28
CDY49086	Canola	cytosol, plastid	47.32	46.19
CDY53554	Canola	plastid	48.05	45.92
CDX87609	Canola	cytosol	50.24	45.88
CDY52768	Canola	plastid	44.39	45.73
CDX81634	Canola	plastid	47.8	45.69
CDY45196	Canola	plastid	47.56	45.67
CDX88265	Canola	cytosol	49.51	45.52
CDY46426	Canola	plastid	44.63	44.63
CDY03036	Canola	plastid	47.8	44.34
CDY41675	Canola	plastid	47.56	43.92
CDY67404	Canola	plastid	47.56	43.82
CDY49042	Canola	cytosol	46.83	39.75
CDY37534	Canola	nucleus	46.83	39.34
CDY47249	Canola	cytosol	45.12	39.28
CDY28689	Canola	nucleus	46.34	39.01
CDY59664	Canola	cytosol	45.37	38.83
CDY04026	Canola	cytosol	44.63	38.61
CDX78606	Canola	nucleus	47.32	38.49
CDX70589	Canola	nucleus	46.83	38.1
CDY00122	Canola	cytosol	44.39	24.76
CDY65043	Canola	cytosol	46.34	12.02

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078C3C9	EnsemblPlants:CDX71350	ProteinID:CDX71350
ProteinID:CDX71350.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00145045001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF13	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EBE25E	SEG:seg	:	:	:	:

Description

BnaC07g06290D

Coordinates

chrLK031792:-:3477193..3479569

Molecular Weight (calculated)

45166.8 Da

IEP (calculated)

9.836

GRAVY (calculated)

-0.395

Length

410 amino acids

Sequence
(BLAST)

001: MGLCWSSSSK SPSTATTTPT TTGNISSGPF KSTTTETSRS NISSTSGFSA GSGGDACPEG QILPIPNLRI FSLAELRATT RNFKSENVLG EGGFGKVFKG
101: WLEEKGPGSH STGTVIAVKK LNSESFQGFE EWQCEVNFLG RVSHPNLVKL LGYCLEGDEL LLVYEYMQKG SLENHLFRKG SVVQPLSWEI RLRIAIGAAK
201: GLAFLHASEK QVIYRDFKAS NILLDSSYNA KLSDFGLAKL GPSASQSHIT TRVMGTHGYA APEYVATGHL YVKSDNYGFG VVLAEILTGL HALDPTRPTG
301: QHNLTDWIKP HLSERRKLRR IMDPRLEGKY PFKSAFRVAQ LSLKCLEPEP KNRPSMTEVV ESLELIVAAN EKPLQRRTTR ASPTVSNQQS HYRREHLSTF
401: QPRHTVARGH

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.