Factsheet for TraesCS6A01G052100.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G069800.1	Wheat	plastid	98.39	98.17
HORVU6Hr1G010050.1	Barley	plastid	98.16	97.94
TraesCSU01G111800.1	Wheat	plastid	97.7	97.48
Os02t0118200-01	Rice	plasma membrane	87.13	88.76
EES04370	Sorghum	plastid	85.75	85.55
Zm00001d054014_P002	Maize	cytosol, plastid	82.76	83.72
Zm00001d015012_P001	Maize	plastid	85.75	82.34
KRH07892	Soybean	cytosol	41.61	69.35
PGSC0003DMT400048049	Potato	plastid	61.38	64.49
Solyc03g032150.2.1	Tomato	plastid	61.38	63.88
PGSC0003DMT400045075	Potato	plastid	60.69	63.61
Solyc01g112220.2.1	Tomato	plastid	59.77	63.41
TraesCS7A01G550300.1	Wheat	plastid	60.46	63.22
KRH28911	Soybean	plastid	53.1	63.11
PGSC0003DMT400038068	Potato	plastid	60.23	62.68
VIT_04s0044g00050.t01	Wine grape	plastid	43.68	62.5
VIT_03s0038g03800.t01	Wine grape	plastid	60.92	62.21
TraesCS6A01G051600.1	Wheat	cytosol	53.1	61.6
KRH39445	Soybean	plastid	56.09	61.46
KRH74099	Soybean	plastid	57.93	61.16
KRH14015	Soybean	plastid	57.93	61.16
TraesCS2A01G404600.1	Wheat	cytosol	63.22	60.18
AT2G17220.1	Thale cress	plastid	57.01	59.9
CDY31372	Canola	plastid	56.32	59.76
Bra002031.1-P	Field mustard	plastid	56.32	59.76
CDY47489	Canola	plastid	56.32	59.47
CDX71350	Canola	plastid	55.86	59.27
TraesCS2A01G039600.1	Wheat	cytosol	57.24	59.0
CDY26797	Canola	plastid	56.32	58.89
TraesCS6A01G253700.1	Wheat	cytosol	60.92	58.5
Bra037280.1-P	Field mustard	plastid	54.25	57.56
KRH28912	Soybean	plastid	52.41	56.3
KRH60921	Soybean	cytosol	47.36	55.68
TraesCS1A01G031200.1	Wheat	plastid	51.49	55.58
Bra017725.1-P	Field mustard	plastid	49.66	55.53
CDY40618	Canola	plastid	49.66	55.53
KRH51603	Soybean	mitochondrion, plastid	46.9	55.28
VIT_18s0122g01270.t01	Wine grape	plastid	52.87	55.02
Bra011627.1-P	Field mustard	plastid	50.8	54.7
PGSC0003DMT400025864	Potato	plastid	52.18	54.44
TraesCS4A01G096900.1	Wheat	plastid	46.44	54.16
CDX72550	Canola	plastid	48.74	54.08
Solyc04g082500.2.1	Tomato	nucleus	51.26	54.0
CDX72549	Canola	plastid	53.56	53.56
Bra017724.1-P	Field mustard	plastid	53.56	53.56
CDY40619	Canola	plastid	53.56	53.56
VIT_18s0122g01260.t01	Wine grape	plastid	54.94	53.35
KRH07906	Soybean	plastid	51.03	53.24
CDY24816	Canola	cytosol, plastid	44.83	53.13
CDX69153	Canola	plastid	52.41	53.02
AT4G35600.2	Thale cress	plastid	51.03	52.86
CDX75515	Canola	plastid	51.72	52.69
CDY24815	Canola	plastid	50.11	51.66
Bra010530.1-P	Field mustard	plastid	50.11	51.66
CDY41645	Canola	plastid	49.89	51.42
KRH07902	Soybean	plastid	45.52	51.16
TraesCS3A01G530200.1	Wheat	plastid	49.89	50.58
TraesCS4A01G016800.1	Wheat	plastid	48.05	49.64
TraesCS7A01G532700.1	Wheat	cytosol	40.23	48.21
TraesCS5A01G480600.1	Wheat	plastid	47.36	47.69
CDX87609	Canola	cytosol	49.2	47.66
Bra008255.1-P	Field mustard	plastid	46.44	47.53
CDX88265	Canola	cytosol	48.51	47.31
CDX85943	Canola	plastid	46.67	46.24
Bra003724.1-P	Field mustard	plastid	47.36	46.09
CDX68102	Canola	plastid	46.67	45.82
TraesCS2A01G098700.1	Wheat	plastid	42.53	45.23
Bra015757.1-P	Field mustard	cytosol, plastid	42.07	45.07
TraesCS7A01G131300.1	Wheat	mitochondrion	42.76	44.93
AT1G76360.1	Thale cress	plastid	49.66	44.63
KRH07896	Soybean	plastid	49.2	44.21
TraesCS3A01G210700.1	Wheat	cytosol	46.67	42.56
TraesCS5A01G193300.2	Wheat	cytosol	45.98	40.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G052100	EnsemblPlants:TraesCS6A01G052100.2	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:26974769..26978326

Molecular Weight (calculated)

47195.9 Da

IEP (calculated)

9.992

GRAVY (calculated)

-0.501

Length

435 amino acids

Sequence
(BLAST)

001: MGNICGGAGK ADVAADYRPS SPGTSNYKTS GSVTTSNSTT GKLSSGGSST FMASTGSGGT SGGFDEAAAG FLEGQILEAP NLRTFTFLEL KTATKNFRPD
101: SVLGEGGFGR VYKGWVDEKT MNPTKSGTGM VVAVKKLNSE SMQGYEEWQS EINFLGRLSH PNLVKLLGYC WEDKELLLVY EFMAKGSLEN HLFRRCAPLS
201: WELRLKIAIG AARGLAFLHA SEKQVIYRDF KASNILLDAS YNAKLSDFGL AKLGPTGSNS HITTRVMGTY GYAAPEYVAT GHLYVKSDVY GFGVVMLEML
301: SGKRALDPNR PNGQQSLVDW AKPYLADRRK LARLMDPQFE GQYNSKQSHQ AAQLTLNCLA GEPRMRPSMK EVLETLEQIE ALKSRTRETR GGSGTSSRDR
401: AHGRSAAVHQ RSSPRGNGDG RRGSRPTNGH ATKAR

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.