Factsheet for VIT_18s0122g01260.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g01270.t01	Wine grape	plastid	85.71	91.87
KRH60921	Soybean	cytosol	55.13	66.76
KRH51603	Soybean	mitochondrion, plastid	54.46	66.12
PGSC0003DMT400025864	Potato	plastid	60.94	65.47
Solyc04g082500.2.1	Tomato	nucleus	59.6	64.65
GSMUA_Achr4P04920_001	Banana	plastid	51.34	59.59
EER95575	Sorghum	cytosol	50.67	58.21
GSMUA_Achr1P18020_001	Banana	plastid	55.13	57.58
VIT_04s0044g00050.t01	Wine grape	plastid	39.06	57.57
GSMUA_Achr3P26960_001	Banana	plastid	48.66	57.22
GSMUA_Achr3P14810_001	Banana	plastid	52.9	57.11
TraesCS2D01G038200.1	Wheat	cytosol	49.55	57.07
VIT_03s0038g03800.t01	Wine grape	plastid	53.12	55.87
Zm00001d048342_P001	Maize	plastid	50.45	55.39
TraesCS6B01G069800.1	Wheat	plastid	53.79	55.28
Os02t0118200-01	Rice	plasma membrane	52.46	55.04
TraesCS6A01G052100.2	Wheat	plastid	53.35	54.94
Os06t0727400-01	Rice	plasma membrane	50.67	54.83
HORVU6Hr1G010050.1	Barley	plastid	53.35	54.82
Zm00001d054014_P002	Maize	cytosol, plastid	52.46	54.65
TraesCSU01G111800.1	Wheat	plastid	53.12	54.59
Bra008255.1-P	Field mustard	plastid	51.56	54.35
GSMUA_Achr2P11330_001	Banana	cytosol	42.19	54.31
CDX87609	Canola	cytosol	54.02	53.9
EER90433	Sorghum	plastid	50.0	53.46
TraesCS7B01G473700.1	Wheat	plastid	49.11	53.4
CDX88265	Canola	cytosol	53.12	53.36
TraesCS2A01G039600.1	Wheat	cytosol	50.22	53.32
Zm00001d014850_P002	Maize	plastid	49.11	53.27
EES04370	Sorghum	plastid	51.79	53.21
TraesCS7A01G550300.1	Wheat	plastid	49.11	52.88
TraesCSU01G105900.1	Wheat	plastid	48.88	52.64
KXG26902	Sorghum	cytosol	54.02	52.49
CDX85943	Canola	plastid	51.34	52.39
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	48.88	52.27
Zm00001d026126_P001	Maize	plastid	53.12	52.19
Bra003724.1-P	Field mustard	plastid	51.79	51.9
CDX68102	Canola	plastid	51.12	51.69
TraesCS6D01G235300.1	Wheat	cytosol	50.22	51.37
Bra015757.1-P	Field mustard	cytosol, plastid	46.43	51.23
TraesCS2B01G422500.1	Wheat	cytosol	51.56	50.99
Zm00001d015012_P001	Maize	plastid	51.56	50.99
AT1G76360.1	Thale cress	plastid	54.46	50.41
VIT_08s0007g00420.t01	Wine grape	plastid	45.54	50.37
HORVU6Hr1G064690.4	Barley	cytosol	51.12	50.22
Zm00001d027509_P002	Maize	cytosol	41.96	50.13
TraesCS6A01G253700.1	Wheat	cytosol	50.67	50.11
TraesCS2D01G401500.2	Wheat	cytosol	50.89	49.89
TraesCS2A01G404600.1	Wheat	cytosol	50.89	49.89
TraesCS6B01G069300.1	Wheat	cytosol	41.74	49.73
Os02t0670100-00	Rice	cytosol, plasma membrane	51.12	49.57
TraesCS6B01G271700.1	Wheat	cytosol	50.67	49.35
TraesCS6A01G051600.1	Wheat	cytosol	41.29	49.33
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	41.29	49.33
EES05745	Sorghum	cytosol	52.01	49.26
HORVU6Hr1G009900.9	Barley	mitochondrion	36.83	49.25
TraesCSU01G110700.2	Wheat	cytosol	40.85	48.67
VIT_01s0026g01880.t01	Wine grape	cytosol	45.31	48.33
Os04t0563900-00	Rice	plasma membrane	51.12	48.21
Zm00001d051424_P001	Maize	plastid	47.54	47.76
VIT_13s0019g01080.t01	Wine grape	plastid	42.63	47.28
VIT_06s0004g04810.t01	Wine grape	plastid	46.43	47.06
VIT_06s0009g01810.t01	Wine grape	plastid	41.52	46.15
VIT_11s0016g05720.t01	Wine grape	cytosol	43.97	45.92
TraesCS2B01G052500.1	Wheat	cytosol	47.32	45.89
HORVU7Hr1G121690.5	Barley	plastid	48.44	43.66
VIT_14s0108g00380.t01	Wine grape	cytosol	44.87	42.32
VIT_01s0026g01620.t01	Wine grape	cytosol	43.53	40.54

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254778	wikigene:100254778	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	ProteinID:CCB62652
ProteinID:CCB62652.1	UniProt:F6I6T4	EMBL:FN596759	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254778	wikigene:LOC100254778	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF5	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000210ABA1	ArrayExpress:VIT_18s0122g01260	EnsemblPlantsGene:VIT_18s0122g01260
EnsemblPlants:VIT_18s0122g01260.t01	RefSeq:XP_002272490	RefSeq:XP_002272490.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr18:+:852777..859014

Molecular Weight (calculated)

49468.3 Da

IEP (calculated)

9.996

GRAVY (calculated)

-0.570

Length

448 amino acids

Sequence
(BLAST)

001: MGNCCGAQAN VNPASSKPPS PELSNNNIKQ DKSIKERSGS GSGNGSSNGG EKTETAETGK IITPNLKMFT FAELKSATRN FRPDTMLGEG GFGRVFKGWV
101: DEKTYAPTKV SVGIPVAVKK SNPESEQGLK EWQSEVKFLG KFTHPNLVKL LGYCWEDKQF LLVYEYMQKG SLENHLFRVG AEPLTWEIRL KIAIGAARGL
201: AFLHTSEKTV IYRDFKSSNV LLDGDYNAKL SDFGLAKLGP SNGDSHVTTR IVGTYGYAAP EYIATGHLYV KSDVYGFGVV LLEMLTGNQA LDLNRPPGQQ
301: NLVEWAKPSL TNKRKLKKIM DPRLRDQYPL KAAAQAAELI LKCLESDPKN RPSMEEVLET LKRINEIKEK PNSKEVKVAT NQPQLHHHRS PYHPKHGGAG
401: AGIGARTPRH GRMDRRGRQL TPKVTCHHSC HLALQVAERG PWQAVGIT

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.