Factsheet for Zm00001d027509_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95575	Sorghum	cytosol	78.67	75.64
Zm00001d048342_P001	Maize	plastid	77.07	70.83
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	65.07	58.23
KRH07892	Soybean	cytosol	36.8	52.87
GSMUA_Achr4P04920_001	Banana	plastid	54.4	52.85
GSMUA_Achr3P14810_001	Banana	plastid	56.8	51.33
GSMUA_Achr1P18020_001	Banana	plastid	58.67	51.28
KRH28911	Soybean	plastid	48.53	49.73
VIT_04s0044g00050.t01	Wine grape	plastid	39.2	48.36
Zm00001d014850_P002	Maize	plastid	53.07	48.18
KRH39445	Soybean	plastid	49.87	47.1
PGSC0003DMT400045075	Potato	plastid	52.0	46.99
GSMUA_Achr3P26960_001	Banana	plastid	47.73	46.98
Zm00001d026126_P001	Maize	plastid	57.07	46.93
Zm00001d054014_P002	Maize	cytosol, plastid	53.33	46.51
PGSC0003DMT400048049	Potato	plastid	50.67	45.89
Solyc01g112220.2.1	Tomato	plastid	50.13	45.85
KRH60921	Soybean	cytosol	45.07	45.68
KRH74099	Soybean	plastid	49.87	45.39
KRH51603	Soybean	mitochondrion, plastid	44.53	45.26
KRH28912	Soybean	plastid	48.8	45.19
KRH14015	Soybean	plastid	49.6	45.15
PGSC0003DMT400038068	Potato	plastid	50.13	44.98
Solyc03g032150.2.1	Tomato	plastid	50.13	44.98
AT2G17220.1	Thale cress	plastid	49.6	44.93
Bra002031.1-P	Field mustard	plastid	48.53	44.39
CDY31372	Canola	plastid	48.53	44.39
Zm00001d015012_P001	Maize	plastid	53.6	44.37
VIT_03s0038g03800.t01	Wine grape	plastid	50.4	44.37
CDX71350	Canola	plastid	48.27	44.15
VIT_18s0122g01270.t01	Wine grape	plastid	49.07	44.02
Zm00001d051424_P001	Maize	plastid	52.0	43.72
PGSC0003DMT400025864	Potato	plastid	48.53	43.65
Solyc04g082500.2.1	Tomato	nucleus	48.0	43.58
CDY47489	Canola	plastid	47.73	43.45
CDY40618	Canola	plastid	45.07	43.44
Bra017725.1-P	Field mustard	plastid	45.07	43.44
CDY26797	Canola	plastid	47.73	43.03
Bra037280.1-P	Field mustard	plastid	46.93	42.93
CDX72550	Canola	plastid	44.53	42.6
Bra011627.1-P	Field mustard	plastid	45.33	42.08
KRH07906	Soybean	plastid	46.67	41.97
VIT_18s0122g01260.t01	Wine grape	plastid	50.13	41.96
AT4G35600.2	Thale cress	plastid	46.4	41.43
CDX72549	Canola	plastid	47.73	41.15
Bra017724.1-P	Field mustard	plastid	47.73	41.15
CDY40619	Canola	plastid	47.73	41.15
Zm00001d011066_P004	Maize	plastid	45.33	41.06
CDY24816	Canola	cytosol, plastid	40.0	40.87
Bra008255.1-P	Field mustard	plastid	46.13	40.71
Bra015757.1-P	Field mustard	cytosol, plastid	44.0	40.64
CDX88265	Canola	cytosol	48.0	40.36
CDX85943	Canola	plastid	47.2	40.32
CDY41645	Canola	plastid	45.33	40.28
CDX75515	Canola	plastid	45.87	40.28
CDX68102	Canola	plastid	47.47	40.18
KRH07902	Soybean	plastid	41.33	40.05
CDX69153	Canola	plastid	45.87	40.0
CDX87609	Canola	cytosol	47.73	39.87
Bra003724.1-P	Field mustard	plastid	47.47	39.82
Zm00001d028613_P001	Maize	plastid	42.93	39.75
CDY24815	Canola	plastid	44.53	39.57
Bra010530.1-P	Field mustard	plastid	44.53	39.57
Zm00001d012958_P001	Maize	plastid	43.73	39.23
Zm00001d034662_P001	Maize	plastid	43.73	39.14
Zm00001d033004_P004	Maize	plastid	44.53	38.3
Zm00001d045191_P001	Maize	mitochondrion	41.33	38.27
Zm00001d022549_P001	Maize	plastid	39.47	38.14
AT1G76360.1	Thale cress	plastid	48.8	37.81
Zm00001d048314_P001	Maize	cytosol, plastid	43.2	35.53
KRH07896	Soybean	plastid	44.8	34.71
Zm00001d044324_P001	Maize	cytosol	42.4	31.67
Zm00001d020213_P003	Maize	cytosol	40.53	30.16
Zm00001d005647_P002	Maize	cytosol	40.53	30.04

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	UniProt:A0A1D6JMR2	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONL93334.1	PFAM:PF07714	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF182	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0008452869	EnsemblPlantsGene:Zm00001d027509	EnsemblPlants:Zm00001d027509_P002	EnsemblPlants:Zm00001d027509_T002	SEG:seg

Description

Probable serine/threonine-protein kinase Cx32 chloroplastic

Coordinates

chr1:+:7072462..7074432

Molecular Weight (calculated)

40378.9 Da

IEP (calculated)

9.881

GRAVY (calculated)

-0.471

Length

375 amino acids

Sequence
(BLAST)

001: MRNCCGSADA DVNPPSRPPT EGPLPPPKPS DGGGAKQEKG GGDGPDQCPG LGRVLEAPRL REFTLAELRV ATRGLKPEMV LGEGGFGPVY KGWVDERTLN
101: PAKSNAGVIV AVKKLNPESF RGLQEWQDRE LLLVVYEFMS NGSLENHLFR RGGNLEALSW SRRLKIATGA ARGLAFLHSS EKQVIHRDFK ASNILLDSTC
201: QDFTAKLSDF GLAKNGPSAG TSHVTTRVMV AYGYAAPEYV ATGQLYVKSD VYGFGVVLLE LLTGLRAHDL NRPTHQHSLV EWARPYLSAG AGKLKSLMDE
301: RMDGQYHTKA ALSGSPGSPA SASTATARAA LPWTTSSPRS RTSRPCSRGA VGQRDLPPRP GARRSSPHHD FSRPC

Best Arabidopsis Sequence Match ( AT1G76360.1 )
(BLAST)

001: MGNICPGSGS STVNHEPVST KPLPVRRVQT PENKKFPPPL VAMPALHPTF PLPETGHKLR PAATPPREKP QHRTTRSVEN PPREKPQEKT RSVENPPREK
101: PQEKTRSVET PPQEKTRPVD NPPSKPVEKL GLGRKAVPPS GKIVTPNLKM FTLVELKTAT KNFRPESVIG EGGFGQVFKG WVDEKTLAPS RAGVGIPVAV
201: KKSNPDSEQG LHEWQCEVRF LGKFHHPNLV KLLGYCWEEN QFLLVYEYLP KGSLENHLFS KGAEALPWDT RLKIAIEAAQ GLTFLHNSEK SVIYRDFKAS
301: NILLDSNFHA KLSDFGLAKN GPINGFSHVT TRVMGTQGYA APEYMATGHL YVRSDVYGFG VVLLELLTGL RALDPNRPSA QQNLVEWAKP GLNQKKKVQK
401: MMDPRLEQKY PLLAVTKTAE LILRCLEADP KNRPPMDDVL RELEVVRTIR DQPQEERRKR SSGPDTNRVR GNDSPYGRRT GRTG

Arabidopsis Description

At1g76360 [Source:UniProtKB/TrEMBL;Acc:A4FVS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.