Factsheet for Zm00001d034662_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93184	Sorghum	plastid	92.6	92.82
Zm00001d012958_P001	Maize	plastid	92.6	92.82
TraesCS5D01G493800.1	Wheat	plastid	85.2	84.0
TraesCS5B01G493500.1	Wheat	plastid	85.2	84.0
Os03t0821900-01	Rice	plastid	84.96	83.96
TraesCS5A01G480600.1	Wheat	plastid	85.44	82.87
HORVU5Hr1G113300.2	Barley	mitochondrion	84.96	79.82
GSMUA_Achr8P34290_001	Banana	plastid	67.3	71.39
Zm00001d011066_P004	Maize	plastid	65.87	66.67
VIT_08s0007g00420.t01	Wine grape	plastid	64.2	66.42
KRH73031	Soybean	plastid	61.58	65.82
KRG99951	Soybean	plastid	63.72	65.12
Solyc04g011520.2.1	Tomato	nucleus	60.86	64.72
PGSC0003DMT400071329	Potato	plastid	60.86	64.72
KRH15105	Soybean	cytosol, nucleus	58.71	64.57
KRH49102	Soybean	plastid	63.01	64.39
VIT_13s0019g01080.t01	Wine grape	plastid	62.05	64.36
Solyc10g084770.1.1	Tomato	cytosol, plastid	63.25	64.16
PGSC0003DMT400028591	Potato	plastid	62.53	63.44
PGSC0003DMT400023009	Potato	cytosol, plastid	62.53	62.98
KRG97912	Soybean	cytosol	57.76	62.69
Solyc09g010850.2.1	Tomato	cytosol, plastid	62.05	62.5
KRH65832	Soybean	plastid	61.1	61.84
KRH75643	Soybean	plastid	60.86	61.74
Zm00001d028613_P001	Maize	plastid	59.67	61.73
Solyc05g053930.2.1	Tomato	plastid	59.43	60.88
KRH15106	Soybean	cytosol	2.15	52.94
Zm00001d045191_P001	Maize	mitochondrion	49.16	50.86
Zm00001d022549_P001	Maize	plastid	46.3	50.0
Zm00001d033004_P004	Maize	plastid	52.03	50.0
Zm00001d048314_P001	Maize	cytosol, plastid	54.18	49.78
Zm00001d048342_P001	Maize	plastid	47.49	48.77
Zm00001d054014_P002	Maize	cytosol, plastid	49.4	48.14
Zm00001d014850_P002	Maize	plastid	47.26	47.94
Zm00001d026126_P001	Maize	plastid	51.79	47.59
Zm00001d015012_P001	Maize	plastid	49.88	46.14
Zm00001d020213_P003	Maize	cytosol	55.13	45.83
Zm00001d005647_P002	Maize	cytosol	54.89	45.45
Zm00001d044324_P001	Maize	cytosol	53.46	44.62
Zm00001d051424_P001	Maize	plastid	46.78	43.95
Zm00001d027509_P002	Maize	cytosol	39.14	43.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	UniProt:B4FZY5	EMBL:BT042673
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
ProteinID:ONM10949.1	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF490	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B7669	EnsemblPlantsGene:Zm00001d034662	EnsemblPlants:Zm00001d034662_P001	EnsemblPlants:Zm00001d034662_T001	SEG:seg

Description

Protein kinase APK1A chloroplastic

Coordinates

chr1:+:299188693..299193386

Molecular Weight (calculated)

46018.1 Da

IEP (calculated)

9.779

GRAVY (calculated)

-0.424

Length

419 amino acids

Sequence
(BLAST)

001: MGNCWGARIK DGSPHPGASG MFSKSSGKDG SRLSGCSSRA SSASMPPSAK TECEILRSAN VKIFTFNNLK AATRNFRPDS VLGEGGFGSV YKGWIDENTL
101: SPCRPGTGIA VAVKRLNHEG LQGHREWLAE VNYLGQFCHP NLVKLIGYCL EDEHRLLVYE FMPRGNMENH LFRRGSYFQP LSWNLRMKVA LGAAKGLAYL
201: HSAEAKVIYR DFKTSNILLD TDYSAKLSDF GLAKDGPVGE KSHVSTRVMG TYGYAAPEYL STGHLTAKSD IYSFGVVLLE MLSGRRAIDK NRPQGEHNLV
301: EWARPYLTHK RKIFRILDTR LEGQYNLNGA QTIAALALEC LSYEAKMRPT MDAVVAILEE LQGSGEAEKK LQEPKAGTKQ APAAVSASMS SSRKPRRKSL
401: GDTKETVGVP DPKPLAHSR

Best Arabidopsis Sequence Match ( AT2G28930.3 )
(BLAST)

001: MGICLSAQIK AVSPGKPGAS PKYMSSEAND SLGSKSSSVS IRTNPRTEGE ILQSPNLKSF TFAELKAATR NFRPDSVLGE GGFGSVFKGW IDEQTLTASK
101: PGTGVVIAVK KLNQDGWQGH QEWLAEVNYL GQFSHPNLVK LIGYCLEDEH RLLVYEFMPR GSLENHLFRR GSYFQPLSWT LRLKVALGAA KGLAFLHNAE
201: TSVIYRDFKT SNILLDSEYN AKLSDFGLAK DGPTGDKSHV STRIMGTYGY AAPEYLATGH LTTKSDVYSY GVVLLEVLSG RRAVDKNRPP GEQKLVEWAR
301: PLLANKRKLF RVIDNRLQDQ YSMEEACKVA TLALRCLTFE IKLRPNMNEV VSHLEHIQTL NEAGGRNIDM VQRRMRRRSD SVAINQKPNA GFARQTAVGV
401: IATAYPRPSD SPLFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.