Factsheet for Zm00001d012958_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034662_P001	Maize	plastid	92.82	92.6
EER93184	Sorghum	plastid	91.39	91.39
Os03t0821900-01	Rice	plastid	84.69	83.49
TraesCS5D01G493800.1	Wheat	plastid	82.54	81.18
TraesCS5B01G493500.1	Wheat	plastid	82.54	81.18
TraesCS5A01G480600.1	Wheat	plastid	82.78	80.09
HORVU5Hr1G113300.2	Barley	mitochondrion	82.3	77.13
GSMUA_Achr8P34290_001	Banana	plastid	67.22	71.14
Zm00001d011066_P004	Maize	plastid	66.27	66.91
VIT_08s0007g00420.t01	Wine grape	plastid	63.64	65.68
KRH73031	Soybean	plastid	61.24	65.31
KRG99951	Soybean	plastid	63.4	64.63
Solyc10g084770.1.1	Tomato	cytosol, plastid	63.64	64.41
KRH15105	Soybean	cytosol, nucleus	58.61	64.3
KRH49102	Soybean	plastid	62.92	64.15
VIT_13s0019g01080.t01	Wine grape	plastid	61.72	63.86
Solyc04g011520.2.1	Tomato	nucleus	60.05	63.71
PGSC0003DMT400071329	Potato	plastid	60.05	63.71
PGSC0003DMT400028591	Potato	plastid	62.92	63.68
PGSC0003DMT400023009	Potato	cytosol, plastid	62.68	62.98
KRG97912	Soybean	cytosol	57.89	62.69
Solyc09g010850.2.1	Tomato	cytosol, plastid	62.2	62.5
Zm00001d028613_P001	Maize	plastid	60.05	61.98
KRH65832	Soybean	plastid	60.77	61.35
KRH75643	Soybean	plastid	60.53	61.26
Solyc05g053930.2.1	Tomato	plastid	59.81	61.12
Zm00001d045191_P001	Maize	mitochondrion	49.52	51.11
Zm00001d033004_P004	Maize	plastid	51.91	49.77
Zm00001d048314_P001	Maize	cytosol, plastid	53.59	49.12
Zm00001d022549_P001	Maize	plastid	45.45	48.97
Zm00001d048342_P001	Maize	plastid	47.61	48.77
Zm00001d014850_P002	Maize	plastid	48.09	48.67
Zm00001d054014_P002	Maize	cytosol, plastid	50.0	48.6
Zm00001d026126_P001	Maize	plastid	52.15	47.81
KRH15106	Soybean	cytosol	1.91	47.06
Zm00001d015012_P001	Maize	plastid	50.24	46.36
Zm00001d020213_P003	Maize	cytosol	55.26	45.83
Zm00001d005647_P002	Maize	cytosol	54.78	45.26
Zm00001d044324_P001	Maize	cytosol	53.11	44.22
Zm00001d051424_P001	Maize	plastid	47.13	44.17
Zm00001d027509_P002	Maize	cytosol	39.23	43.73

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100274061	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	ProteinID:AQK61890.1
UniProt:B4FYV5	EMBL:BT042293	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF490	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B82E5	EnsemblPlantsGene:Zm00001d012958	EnsemblPlants:Zm00001d012958_P001	EnsemblPlants:Zm00001d012958_T001
SEG:seg	:	:	:	:	:

Description

Protein kinase APK1A chloroplastic

Coordinates

chr5:-:2364388..2370512

Molecular Weight (calculated)

45770.7 Da

IEP (calculated)

9.920

GRAVY (calculated)

-0.410

Length

418 amino acids

Sequence
(BLAST)

001: MGNCWGARIK DGSAGASGMF SKSGGKDGSR LSGCSSRASS ASMPPSVKTE CEILQSANVK IFTFNNLKAA TRNFRPDSVL GEGGFGSVYK GWVDENTLSP
101: CRPGTGIAVA VKRLNHEGLQ GHREWWAEVN YLGQFCHPNL VKLIGYCLED EHRLLVYEFM PRGSLENHLF RRGSYFQPLS WNLRMKVALG AAKGLAYLHS
201: GEAKVIYRDF KTSNILLDTD YSAKLSDFGL AKDGPVGEKS HVSTRVMGTY GYAAPEYLST GHLTAKSDIY SFGVVLLEVL SGRRAIDKNR PQGEHNLVEW
301: ARPYLTHKRK IFRILDTRLE GQYNLDGAQA IAALSLECLS YEAKMRPTMD AVVTILEELQ DSGEAEKRQG PKAGTKQAPA AAAASASKSS RKLRRRTLGG
401: TKETTVGPNP KPLLARSR

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.