Factsheet for Zm00001d026126_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26902	Sorghum	cytosol	89.47	88.5
TraesCS2A01G404600.1	Wheat	cytosol	72.37	72.21
TraesCS2B01G422500.1	Wheat	cytosol	71.71	72.19
TraesCS2D01G038200.1	Wheat	cytosol	61.4	71.98
TraesCS2D01G401500.2	Wheat	cytosol	71.49	71.33
Os04t0563900-00	Rice	plasma membrane	74.12	71.16
GSMUA_Achr4P04920_001	Banana	plastid	59.87	70.73
KRH07892	Soybean	cytosol	39.47	68.97
TraesCS2A01G039600.1	Wheat	cytosol	63.38	68.48
GSMUA_Achr1P18020_001	Banana	plastid	62.5	66.43
GSMUA_Achr3P14810_001	Banana	plastid	59.87	65.78
Zm00001d054014_P002	Maize	cytosol, plastid	59.65	63.26
GSMUA_Achr3P26960_001	Banana	plastid	52.19	62.47
Zm00001d014850_P002	Maize	plastid	55.92	61.74
Zm00001d048342_P001	Maize	plastid	55.04	61.52
KRH28911	Soybean	plastid	49.34	61.48
PGSC0003DMT400045075	Potato	plastid	55.7	61.2
TraesCS2B01G052500.1	Wheat	cytosol	61.84	61.04
Solyc01g112220.2.1	Tomato	plastid	54.82	60.98
Zm00001d015012_P001	Maize	plastid	60.31	60.71
VIT_04s0044g00050.t01	Wine grape	plastid	40.35	60.53
KRH39445	Soybean	plastid	52.63	60.45
PGSC0003DMT400048049	Potato	plastid	54.82	60.39
Solyc03g032150.2.1	Tomato	plastid	54.39	59.33
PGSC0003DMT400038068	Potato	plastid	54.39	59.33
Bra002031.1-P	Field mustard	plastid	53.29	59.27
CDY31372	Canola	plastid	53.29	59.27
VIT_03s0038g03800.t01	Wine grape	plastid	55.26	59.15
CDX71350	Canola	plastid	53.07	59.02
KRH14015	Soybean	plastid	53.29	58.98
AT2G17220.1	Thale cress	plastid	53.51	58.94
KRH74099	Soybean	plastid	52.85	58.5
CDY47489	Canola	plastid	52.19	57.77
KRH51603	Soybean	mitochondrion, plastid	46.71	57.72
Zm00001d051424_P001	Maize	plastid	56.36	57.62
CDY26797	Canola	plastid	52.41	57.45
Zm00001d027509_P002	Maize	cytosol	46.93	57.07
KRH60921	Soybean	cytosol	46.05	56.76
VIT_18s0122g01270.t01	Wine grape	plastid	51.32	55.98
Bra037280.1-P	Field mustard	plastid	50.22	55.85
KRH28912	Soybean	plastid	49.34	55.56
Solyc04g082500.2.1	Tomato	nucleus	49.78	54.96
Zm00001d011066_P004	Maize	plastid	49.56	54.59
PGSC0003DMT400025864	Potato	plastid	49.78	54.44
Bra011627.1-P	Field mustard	plastid	47.37	53.47
Zm00001d028613_P001	Maize	plastid	47.37	53.33
KRH07902	Soybean	plastid	45.18	53.23
VIT_18s0122g01260.t01	Wine grape	plastid	52.19	53.12
CDY40618	Canola	plastid	44.74	52.44
Bra017725.1-P	Field mustard	plastid	44.74	52.44
CDX72549	Canola	plastid	49.78	52.18
Zm00001d012958_P001	Maize	plastid	47.81	52.15
KRH07906	Soybean	plastid	47.59	52.04
Zm00001d034662_P001	Maize	plastid	47.59	51.79
CDY41645	Canola	plastid	47.81	51.66
Bra010530.1-P	Field mustard	plastid	47.81	51.66
CDY24815	Canola	plastid	47.81	51.66
CDX72550	Canola	plastid	44.3	51.53
CDY40619	Canola	plastid	49.12	51.49
Bra017724.1-P	Field mustard	plastid	49.12	51.49
AT4G35600.2	Thale cress	plastid	47.37	51.43
CDX75515	Canola	plastid	48.03	51.29
CDX69153	Canola	plastid	48.25	51.16
Zm00001d022549_P001	Maize	plastid	43.2	50.77
CDY24816	Canola	cytosol, plastid	40.35	50.14
Bra008255.1-P	Field mustard	plastid	45.61	48.94
CDX87609	Canola	cytosol	48.03	48.78
CDX88265	Canola	cytosol	47.37	48.43
CDX85943	Canola	plastid	46.27	48.06
Zm00001d033004_P004	Maize	plastid	45.83	47.94
Bra003724.1-P	Field mustard	plastid	46.71	47.65
CDX68102	Canola	plastid	46.05	47.4
Bra015757.1-P	Field mustard	cytosol, plastid	41.67	46.8
AT1G76360.1	Thale cress	plastid	49.34	46.49
Zm00001d045191_P001	Maize	mitochondrion	41.01	46.17
Zm00001d048314_P001	Maize	cytosol, plastid	44.52	44.52
KRH07896	Soybean	plastid	46.05	43.39
Zm00001d044324_P001	Maize	cytosol	45.18	41.04
Zm00001d005647_P002	Maize	cytosol	44.74	40.32
Zm00001d020213_P003	Maize	cytosol	44.52	40.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	UniProt:A0A1D6JCY4	ProteinID:AQK45687.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF13
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0008DB3502
EnsemblPlantsGene:Zm00001d026126	EnsemblPlants:Zm00001d026126_P001	EnsemblPlants:Zm00001d026126_T001	SEG:seg	:	:

Description

bnl10.13aProbable serine/threonine-protein kinase Cx32 chloroplastic

Coordinates

chr10:+:139063429..139066366

Molecular Weight (calculated)

49441.4 Da

IEP (calculated)

9.326

GRAVY (calculated)

-0.488

Length

456 amino acids

Sequence
(BLAST)

001: MGNCLGSDEA AELEVVKNSG QPQAAATAAP AMAPHKSEGS MSSGSGPSSS SRSAGSSMSS IATTTGRSGG STSTSSGSRP LRAAAAASYR EEEEEEEEEK
101: EGRILEAPNL RIFTFAELRA ATRNFRPDTV LGEGGFGRVY KGWVDERTMN PTRSGIGMVV AVKKLNQESV QGLQEWQSEV NFLGRLSHPN LVRLLGYCVE
201: DRELLLVYEY MPKGSLENHL FRKGGSFEPI SWNLRLRIAI GAARGLAFLH SSEKQVIYRD FKASNILLDT NYNAKLSDFG LAKNGPTGGD SHVTTRVMGT
301: YGYAAPEYVA TGHLYVKSDV YGFGVVLLEM LTGLRALDTA RPAQQHNLVE WAKPYLADRR KLPRLVDPRL EGQYPSKAAL QAAQLTLRCL EGDPRSRPSM
401: AEVVLAIEAM EQLRVRPRDE AAPSGHAHGH GRSSRPRTGP GRAGSSSHHR QSPSAR

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.