Factsheet for PGSC0003DMT400045075

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400048049	Potato	plastid	80.0	80.19
KRH07892	Soybean	cytosol	48.19	76.63
KRH39445	Soybean	plastid	65.78	68.77
VIT_04s0044g00050.t01	Wine grape	plastid	49.16	67.11
KRH28911	Soybean	plastid	59.04	66.94
GSMUA_Achr4P04920_001	Banana	plastid	61.69	66.32
GSMUA_Achr3P14810_001	Banana	plastid	62.41	62.41
PGSC0003DMT400038068	Potato	plastid	61.93	61.48
GSMUA_Achr3P26960_001	Banana	plastid	56.14	61.15
TraesCS6A01G052100.2	Wheat	plastid	63.61	60.69
TraesCS6B01G069800.1	Wheat	plastid	63.61	60.55
HORVU6Hr1G010050.1	Barley	plastid	63.37	60.32
TraesCSU01G111800.1	Wheat	plastid	63.37	60.32
Zm00001d054014_P002	Maize	cytosol, plastid	62.41	60.23
EER95575	Sorghum	cytosol	56.39	60.0
TraesCS2D01G038200.1	Wheat	cytosol	56.14	59.9
Os02t0118200-01	Rice	plasma membrane	61.45	59.72
EES04370	Sorghum	plastid	62.65	59.63
TraesCS7B01G473700.1	Wheat	plastid	59.04	59.47
GSMUA_Achr1P18020_001	Banana	plastid	61.45	59.44
EER90433	Sorghum	plastid	60.0	59.43
Os06t0727400-01	Rice	plasma membrane	59.28	59.42
Zm00001d014850_P002	Maize	plastid	58.8	59.08
KRH28912	Soybean	plastid	57.35	58.77
TraesCS7A01G550300.1	Wheat	plastid	58.8	58.65
TraesCSU01G105900.1	Wheat	plastid	58.8	58.65
Zm00001d015012_P001	Maize	plastid	63.61	58.28
Bra011627.1-P	Field mustard	plastid	56.14	57.67
KRH07902	Soybean	plastid	53.73	57.62
KRH07906	Soybean	plastid	57.83	57.55
CDY24816	Canola	cytosol, plastid	50.6	57.22
TraesCS2B01G422500.1	Wheat	cytosol	62.41	57.17
Zm00001d048342_P001	Maize	plastid	56.14	57.11
TraesCS6D01G235300.1	Wheat	cytosol	60.24	57.08
CDY40618	Canola	plastid	53.49	57.07
Bra017725.1-P	Field mustard	plastid	53.49	57.07
TraesCS2A01G039600.1	Wheat	cytosol	57.83	56.87
CDX72550	Canola	plastid	53.25	56.38
AT4G35600.2	Thale cress	plastid	56.63	55.95
Zm00001d026126_P001	Maize	plastid	61.2	55.7
KXG26902	Sorghum	cytosol	61.69	55.53
PGSC0003DMT400025864	Potato	plastid	55.66	55.4
TraesCS2D01G401500.2	Wheat	cytosol	60.96	55.36
TraesCS2A01G404600.1	Wheat	cytosol	60.96	55.36
CDX75515	Canola	plastid	56.87	55.27
TraesCS6B01G271700.1	Wheat	cytosol	61.2	55.22
Bra010530.1-P	Field mustard	plastid	56.14	55.21
CDY24815	Canola	plastid	56.14	55.21
TraesCS6A01G253700.1	Wheat	cytosol	60.24	55.19
CDX69153	Canola	plastid	57.11	55.12
HORVU6Hr1G064690.4	Barley	cytosol	60.48	55.04
CDY41645	Canola	plastid	55.42	54.5
HORVU4Hr1G082100.2	Barley	cytosol, nucleus, plastid	54.94	54.42
PGSC0003DMT400011261	Potato	plastid	52.53	54.36
Bra017724.1-P	Field mustard	plastid	56.87	54.25
CDY40619	Canola	plastid	56.87	54.25
CDX72549	Canola	plastid	56.87	54.25
Os04t0563900-00	Rice	plasma membrane	61.45	53.68
Os02t0670100-00	Rice	cytosol, plasma membrane	59.76	53.68
PGSC0003DMT400071329	Potato	plastid	50.6	53.3
GSMUA_Achr2P11330_001	Banana	cytosol	44.58	53.16
PGSC0003DMT400002280	Potato	plastid	52.77	52.27
Zm00001d027509_P002	Maize	cytosol	46.99	52.0
PGSC0003DMT400095910	Potato	cytosol	41.2	51.98
PGSC0003DMT400028591	Potato	plastid	51.33	51.57
EES05745	Sorghum	cytosol	58.55	51.37
HORVU6Hr1G009900.9	Barley	mitochondrion	41.45	51.34
TraesCSU01G111300.1	Wheat	cytosol, mitochondrion, plastid	46.27	51.2
PGSC0003DMT400065801	Potato	plastid	51.57	50.95
Zm00001d051424_P001	Maize	plastid	54.22	50.45
TraesCS6A01G051600.1	Wheat	cytosol	45.54	50.4
PGSC0003DMT400023009	Potato	cytosol, plastid	50.12	50.0
TraesCS2B01G052500.1	Wheat	cytosol	55.42	49.78
TraesCSU01G110700.2	Wheat	cytosol	44.58	49.2
PGSC0003DMT400082362	Potato	plastid	46.75	48.99
TraesCS6B01G069300.1	Wheat	cytosol	44.34	48.94
HORVU7Hr1G121690.5	Barley	plastid	58.31	48.69
KRH07896	Soybean	plastid	55.9	47.93
PGSC0003DMT400003582	Potato	cytosol	40.48	47.32
PGSC0003DMT400045429	Potato	cytosol	48.43	42.14
PGSC0003DMT400002229	Potato	cytosol	47.71	41.08
PGSC0003DMT400079361	Potato	cytosol	45.3	39.25
PGSC0003DMT400049853	Potato	plasma membrane	43.86	37.76

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102591612	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BH22	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400017479
PGSC:PGSC0003DMG400017479	EnsemblPlants:PGSC0003DMT400045075	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF103	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294A7B4	RefSeq:XP_006340004.1	SEG:seg	:	:

Description

Serine/threonine-protein kinase cx32 [Source:PGSC_GENE;Acc:PGSC0003DMG400017479]

Coordinates

chr2:+:19218984..19224586

Molecular Weight (calculated)

45305.0 Da

IEP (calculated)

9.950

GRAVY (calculated)

-0.422

Length

415 amino acids

Sequence
(BLAST)

001: MGNCFGSEIL DPNPSTKSNS STRPSTPDTS KNYSSGVGFS TGSSTGRSRF SVAASEDSCL NGEILPTPNL KTYSFSDLKA ATRNFKSDTV LGVGGFGTVF
101: KGWVDEKTLT PTKVGTGMVV AIKKLNSESV QGFEEWQAEV NFLGRLSHPN LVKLLGYCWE DKELLLVYEF MPKGSLENHL FRRSTAIEPL SWELRLKIAI
201: GAARGLAFLH SSEKQIIYRD FKASNILLDG SYHAKLSDFG LAKVGPSAGN SHVTTRVMGT YGYAAPEYIA TGHLYVKSDV YGFGVVLLEL LTGLRALDTK
301: RPGGQHNLVD WMKPMLSNKR KLKSIMDARM EGQYSSKAAT LTAQLTMKCL EGEPKKRPSM KEVVEVLEQV ESIKEKPKAS KSKTESSSHR YKQSPRSYPS
401: PRGASNHGSG AGSGR

Best Arabidopsis Sequence Match ( AT2G17220.2 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSGTFKS SNNTTTTGTS RGSNISSNSG FSVASGEDAY PDGQILPIPN LRIFSLAELR ASTRNFRSEN VLGEGGFGKV
101: FKGWLEDKTP GKQSNGTVIA VKKLNAESFQ GFEEWQCEVN FLGRVSHPNL VKLLGYCLEG EELLLVYEYM QKGSLENHLF RKGSAVQPLS WEIRLKIAIG
201: AAKGLAFLHA SEKQVIYRDF KASNILLDGS YNAKISDFGL AKLGPSASQS HITTRVMGTH GYAAPEYVAT GHLYVKSDVY GFGVVLAEIL TGLHALDPTR
301: PTGQHNLTEW IKPHLSERRK LRSIMDPRLE GKYPFKSAFR VAQLALKCLG PEPKNRPSMK EVVESLELIE AANEKPLERR TTRASPSIRQ QQGHYRPQQL
401: SSFRPRQNVS RAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.