CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051424_P001	Maize	plastid	79.7	84.53
TraesCS6D01G235300.1	Wheat	cytosol	73.36	79.22
HORVU6Hr1G064690.4	Barley	cytosol	74.84	77.63
TraesCS6A01G253700.1	Wheat	cytosol	74.21	77.48
Os02t0670100-00	Rice	cytosol, plasma membrane	74.63	76.41
TraesCS6B01G271700.1	Wheat	cytosol	74.0	76.09
GSMUA_Achr4P04920_001	Banana	plastid	55.18	67.62
KRH07892	Soybean	cytosol	37.0	67.05
EER95575	Sorghum	cytosol	52.43	63.59
GSMUA_Achr3P14810_001	Banana	plastid	55.6	63.37
KXG26902	Sorghum	cytosol	60.89	62.47
GSMUA_Achr1P18020_001	Banana	plastid	56.66	62.47
GSMUA_Achr3P26960_001	Banana	plastid	48.84	60.63
EES04370	Sorghum	plastid	55.18	59.86
KRH39445	Soybean	plastid	49.47	58.94
VIT_04s0044g00050.t01	Wine grape	plastid	37.84	58.88
KRH74099	Soybean	plastid	51.16	58.74
PGSC0003DMT400045075	Potato	plastid	51.37	58.55
Solyc01g112220.2.1	Tomato	plastid	50.74	58.54
KRH14015	Soybean	plastid	50.95	58.5
EER90433	Sorghum	plastid	51.8	58.47
KRH28911	Soybean	plastid	45.24	58.47
VIT_03s0038g03800.t01	Wine grape	plastid	52.43	58.22
PGSC0003DMT400048049	Potato	plastid	50.53	57.73
PGSC0003DMT400038068	Potato	plastid	50.95	57.66
Solyc03g032150.2.1	Tomato	plastid	50.74	57.42
CDY31372	Canola	plastid	49.68	57.32
Bra002031.1-P	Field mustard	plastid	49.68	57.32
KRH51603	Soybean	mitochondrion, plastid	44.61	57.18
CDX71350	Canola	plastid	49.47	57.07
KRH60921	Soybean	cytosol	44.61	57.03
AT2G17220.1	Thale cress	plastid	49.89	57.0
CDY47489	Canola	plastid	48.2	55.34
CDY26797	Canola	plastid	48.2	54.81
VIT_18s0122g01270.t01	Wine grape	plastid	47.36	53.59
Bra037280.1-P	Field mustard	plastid	46.3	53.41
EER92482	Sorghum	plastid	42.49	52.89
Solyc04g082500.2.1	Tomato	nucleus	46.09	52.78
PGSC0003DMT400025864	Potato	plastid	46.51	52.76
KRH28912	Soybean	plastid	44.82	52.35
Bra011627.1-P	Field mustard	plastid	44.61	52.23
EES18885	Sorghum	plastid	44.61	52.1
VIT_18s0122g01260.t01	Wine grape	plastid	49.26	52.01
CDY40618	Canola	plastid	42.71	51.93
Bra017725.1-P	Field mustard	plastid	42.71	51.93
AT4G35600.2	Thale cress	plastid	45.88	51.67
KRH07906	Soybean	plastid	45.45	51.56
CDX69153	Canola	plastid	46.51	51.16
Bra017724.1-P	Field mustard	plastid	46.93	51.03
CDY40619	Canola	plastid	46.93	51.03
EER93184	Sorghum	plastid	44.82	50.72
CDX72550	Canola	plastid	41.86	50.51
CDY41645	Canola	plastid	45.03	50.47
KRH07902	Soybean	plastid	41.23	50.39
CDX75515	Canola	plastid	45.45	50.35
CDX72549	Canola	plastid	46.3	50.34
Bra010530.1-P	Field mustard	plastid	44.82	50.24
CDY24815	Canola	plastid	44.82	50.24
CDY24816	Canola	cytosol, plastid	38.27	49.32
CDX87609	Canola	cytosol	46.51	49.0
CDX88265	Canola	cytosol	45.88	48.65
Bra008255.1-P	Field mustard	plastid	43.13	48.0
Bra003724.1-P	Field mustard	plastid	45.24	47.87
CDX85943	Canola	plastid	44.4	47.84
CDX68102	Canola	plastid	44.61	47.63
KXG19409	Sorghum	mitochondrion	41.23	47.56
Bra015757.1-P	Field mustard	cytosol, plastid	40.38	47.04
EER94269	Sorghum	plastid	42.71	46.65
EER99941	Sorghum	plastid	40.17	46.45
AT1G76360.1	Thale cress	plastid	47.15	46.07
EER92783	Sorghum	plastid	42.71	46.01
KRH07896	Soybean	plastid	43.34	42.36
EES03187	Sorghum	cytosol	42.49	40.85
EER96629	Sorghum	cytosol	41.44	39.12
OQU78536	Sorghum	plasma membrane	41.44	32.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8073917	UniProt:C5Y1B4	EnsemblPlants:EES05745
ProteinID:EES05745	ProteinID:EES05745.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3004G286000	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A85EF5	RefSeq:XP_002452769.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:62844358..62848342

Molecular Weight (calculated)

50456.1 Da

IEP (calculated)

10.384

GRAVY (calculated)

-0.348

Length

473 amino acids

Sequence
(BLAST)

001: MGNCFGSDVP EVGAVKAMAH AHHAHPQVAM AKRVMAAPSP AHHAAVSQQG VPGKKSPPST ATTTTTGGTA SKRPAAGGGA ATSGGGGGEP SRHQPVDGRI
101: LEVPNLRVFT FAELRAATRN FKADTVVGEG GFGRVHKGWV DERTMSPARN GAGVPVAVKK LNPESLQGVQ EWQSEVNFLG RLSHPNLVRL LGYCWEDKEL
201: LLVYEYMAKG SLENHLFRSE PRKGGAAVHQ PLLPWSLRLR IAIGAARGLA FLHSSEKHVI YRDFKASNIL LDTHFNAKLS DFGLAKDGPA GGSSHVTTRV
301: MGTYGYAAPE YVATGHLYVK SDVYGFGVVL LEILTGLRAL DTDRPAAQHN LVDWAKPYLA DRRKLARLVD PRLEGQYPSR GAQRAAQLTL RCLAADHKNR
401: PSMREVVAVL EEIESMSLSS RAAARLDGSA SPRPPTARNG HSQRPGSGSS LDWAGPAPAG GHSAHPSARV TTR

Best Arabidopsis Sequence Match ( AT2G17220.1 )
(BLAST)

001: MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK
101: VFKGWLEDKT PGKQSNGTVI AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL FRKGSAVQPL SWEIRLKIAI
201: GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT
301: RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ
401: LSSFRPRQNV SRAH

Arabidopsis Description

PIX13Probable serine/threonine-protein kinase PIX13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.