CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011066_P004	Maize	plastid	96.3	94.2
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	65.93	88.41
Os05t0110900-01	Rice	plasma membrane	81.48	83.54
TraesCS1D01G032600.1	Wheat	plastid	82.47	82.88
TraesCS1A01G031200.1	Wheat	plastid	81.98	82.38
TraesCS1B01G038800.1	Wheat	plastid	81.98	82.18
GSMUA_Achr6P15230_001	Banana	plastid	73.09	77.49
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	76.05	73.86
GSMUA_Achr10P...	Banana	plastid	73.58	71.46
GSMUA_Achr11P...	Banana	cytosol	65.93	71.39
GSMUA_Achr10P...	Banana	plastid	71.11	69.73
KRH73031	Soybean	plastid	67.41	69.64
EER92482	Sorghum	plastid	64.69	68.95
KRH15105	Soybean	cytosol, nucleus	64.69	68.77
VIT_08s0007g00420.t01	Wine grape	plastid	67.9	67.9
VIT_13s0019g01080.t01	Wine grape	plastid	67.65	67.82
EER93184	Sorghum	plastid	69.88	67.7
KRG99951	Soybean	plastid	67.9	67.07
KRH49102	Soybean	plastid	67.9	67.07
KRG97912	Soybean	cytosol	63.7	66.84
Solyc04g011520.2.1	Tomato	nucleus	64.69	66.5
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	58.77	66.48
PGSC0003DMT400071329	Potato	plastid	64.2	65.99
KRH75643	Soybean	plastid	66.91	65.62
GSMUA_Achr8P02170_001	Banana	plastid	60.99	65.52
KRH65832	Soybean	plastid	66.91	65.46
PGSC0003DMT400023009	Potato	cytosol, plastid	65.43	63.7
Solyc10g084770.1.1	Tomato	cytosol, plastid	64.69	63.44
Solyc09g010850.2.1	Tomato	cytosol, plastid	64.44	62.74
PGSC0003DMT400028591	Potato	plastid	63.95	62.71
Solyc05g053930.2.1	Tomato	plastid	60.99	60.39
EER92783	Sorghum	plastid	57.78	53.3
EES04370	Sorghum	plastid	56.54	52.52
EER94269	Sorghum	plastid	55.56	51.96
KXG19409	Sorghum	mitochondrion	52.1	51.46
EER95575	Sorghum	cytosol	49.14	51.03
EER99941	Sorghum	plastid	50.62	50.12
KXG26902	Sorghum	cytosol	56.54	49.67
EER90433	Sorghum	plastid	51.36	49.64
EES03187	Sorghum	cytosol	57.28	47.15
KRH15106	Soybean	cytosol	1.98	47.06
EER96629	Sorghum	cytosol	57.28	46.31
EES05745	Sorghum	cytosol	52.1	44.61
OQU78536	Sorghum	plasma membrane	53.83	35.68

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EntrezGene:8068666	UniProt:C5YYH3
EnsemblPlants:EES18885	ProteinID:EES18885	ProteinID:EES18885.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3009G011700	SUPFAM:SSF56112
unigene:Sbi.1840	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A88A0A	RefSeq:XP_002440455.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:1043976..1047378

Molecular Weight (calculated)

44477.0 Da

IEP (calculated)

10.050

GRAVY (calculated)

-0.439

Length

405 amino acids

Sequence
(BLAST)

001: MGNCWGAKIS SDSPSRGAIS PSGATSKFTS RNGAAALSGC SSHASSASML PTPRSEDEIL ESANVKAFTF NELRTATRNF RPDSVLGEGG FGSVFKGWID
101: EKTLAPTRPG TGMVIAVKKL NQEGYQGHKE WLTEVNYLGT LSHPYLVKLV GYCLEDEQRL LVYEFMPRGS LENHLFRRSS YFQPLSWNLR MKIALGAAKG
201: LAYLHSDEAK VIYRDFKTSN VLLDANFNAK LSDFGLAKDG PTGDKSHVST RVMGTHGYAA PEYLATGHLT TKSDVYSFGV VLLEMLSGRR ALDKNRPNGE
301: HNLVEWARPY LRSKRRIFRI LDPRLGGQYS LARAQKAAAL ALQCLSVESR HRPSMDEVVT ALEQLQDTKE GGNHHLQKRP SSRSMDNNGV KAAVKGKPAP
401: SVKPV

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.