Factsheet for GSMUA_Achr8P20820_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004690.3	Barley	mitochondrion, plastid	61.63	85.1
GSMUA_Achr10P...	Banana	plastid	79.86	79.86
GSMUA_Achr6P15230_001	Banana	plastid	73.14	79.84
Os05t0110900-01	Rice	plasma membrane	74.58	78.73
GSMUA_Achr11P...	Banana	cytosol	70.02	78.07
TraesCS1A01G031200.1	Wheat	plastid	74.34	76.92
TraesCS1D01G032600.1	Wheat	plastid	74.1	76.67
GSMUA_Achr8P34290_001	Banana	plastid	72.42	76.46
EES18885	Sorghum	plastid	73.86	76.05
TraesCS1B01G038800.1	Wheat	plastid	73.62	75.99
GSMUA_Achr10P...	Banana	plastid	73.86	74.58
HORVU3Hr1G115860.6	Barley	plastid	50.6	73.78
Zm00001d011066_P004	Maize	plastid	72.9	73.43
Os03t0274800-01	Rice	plasma membrane	65.47	72.99
TraesCS7D01G518500.1	Wheat	cytosol	61.15	72.65
TraesCS7B01G448200.1	Wheat	cytosol	61.63	72.6
VIT_13s0019g01080.t01	Wine grape	plastid	70.26	72.52
TraesCS4A01G096900.1	Wheat	plastid	64.27	71.85
TraesCS4D01G208400.1	Wheat	plastid	64.27	71.85
GSMUA_Achr8P02170_001	Banana	plastid	64.51	71.35
TraesCS4B01G207500.1	Wheat	plastid	63.79	71.31
HORVU4Hr1G059750.3	Barley	plastid	64.27	71.09
Os01t0973500-01	Rice	plasma membrane	69.3	70.83
EER92482	Sorghum	plastid	64.51	70.79
TraesCS3B01G600300.1	Wheat	plastid	72.42	70.4
TraesCS3D01G535700.1	Wheat	plastid	72.18	70.33
TraesCS3A01G530200.1	Wheat	plastid	72.18	70.16
KRH73031	Soybean	plastid	65.23	69.39
VIT_08s0007g00420.t01	Wine grape	plastid	67.15	69.14
KRG99951	Soybean	plastid	67.87	69.02
Solyc10g084770.1.1	Tomato	cytosol, plastid	67.87	68.52
KRH15105	Soybean	cytosol, nucleus	62.59	68.5
KRH49102	Soybean	plastid	67.15	68.29
PGSC0003DMT400028591	Potato	plastid	67.63	68.28
KRG97912	Soybean	cytosol	63.07	68.13
PGSC0003DMT400023009	Potato	cytosol, plastid	66.67	66.83
PGSC0003DMT400071329	Potato	plastid	63.07	66.75
Solyc04g011520.2.1	Tomato	nucleus	63.07	66.75
Solyc09g010850.2.1	Tomato	cytosol, plastid	66.43	66.59
KRH75643	Soybean	plastid	65.95	66.59
KRH65832	Soybean	plastid	65.47	65.94
Zm00001d028613_P001	Maize	plastid	63.79	65.68
Solyc05g053930.2.1	Tomato	plastid	64.27	65.53
HORVU1Hr1G004590.1	Barley	cytosol, mitochondrion	54.92	63.97
TraesCS7B01G449500.1	Wheat	cytosol	51.32	61.67
TraesCS7A01G532700.1	Wheat	cytosol	53.0	60.88
GSMUA_Achr4P04920_001	Banana	plastid	53.48	57.77
TraesCS7D01G519800.1	Wheat	cytosol	49.88	56.83
TraesCS7D01G519900.2	Wheat	plastid	53.24	54.68
GSMUA_Achr2P07470_001	Banana	plastid	54.2	54.33
GSMUA_Achr1P21600_001	Banana	plastid	53.72	54.24
GSMUA_Achr3P14810_001	Banana	plastid	53.0	53.25
KRH15106	Soybean	cytosol	2.16	52.94
GSMUA_Achr1P18020_001	Banana	plastid	54.2	52.68
GSMUA_Achr6P08550_001	Banana	plastid	48.68	52.05
GSMUA_AchrUn_...	Banana	plastid	54.2	51.95
GSMUA_Achr10P...	Banana	plastid	48.68	51.92
GSMUA_Achr6P10640_001	Banana	plastid	49.64	51.24
GSMUA_Achr3P26530_001	Banana	plasma membrane	49.88	51.23
GSMUA_Achr3P26960_001	Banana	plastid	46.76	51.18
GSMUA_Achr2P11330_001	Banana	cytosol	42.69	51.15
GSMUA_Achr10P...	Banana	cytosol	56.83	41.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G20820_001	EnsemblPlants:GSMUA_Achr8P20820_001	EnsemblPlants:GSMUA_Achr8T20820_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0TS85	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF191	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294B669	SEG:seg	:	:	:

Description

Protein kinase APK1A, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G20820_001]

Coordinates

chr8:-:25902918..25905918

Molecular Weight (calculated)

45677.3 Da

IEP (calculated)

10.062

GRAVY (calculated)

-0.428

Length

417 amino acids

Sequence
(BLAST)

001: MGNCWGAQVK AESPSDGFFA SGLHSKSSSR DGKKLSGSSS KVSAASVPPT PRSEGEILQS VNVKSFTFTE LRIATRNFRP DSVVGEGGFG SVFKGWIDEH
101: TLAAAKPGTG VVIAVKKLNQ EGHQGHREWL AEVNYLGQLS HPHLVKLIGY CLEDEQRLLV YEFMPRGSLE NHLFRRGSYF QPLSWKLRMK IALGAAKGLA
201: FLHSDVAKVI YRDFKASNVL LDSNHEAKLS DFGLAKDGPT GDKSHVSTRV MGTYGYAAPE YLATGHLTAK SDVYSFGVVL LELLSGRRAV DKNRPTGEHN
301: LVEWARPYLT SKRKIFRVLD PRLGGQYSLV GAQKAAVLAL QCLSSEARYR PTMDQVVAAL EQLQDAKDTE RSPQSEQKSS GQSIGSNSHR SLRRRSNECA
401: KGKVAHHRPP ASPLCTN

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.