CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0274800-01	Rice	plasma membrane	90.0	91.44
Zm00001d028613_P001	Maize	plastid	91.84	86.17
TraesCS4D01G208400.1	Wheat	plastid	84.47	86.06
HORVU4Hr1G059750.3	Barley	plastid	85.26	85.94
TraesCS4A01G096900.1	Wheat	plastid	84.21	85.79
TraesCS4B01G207500.1	Wheat	plastid	83.68	85.25
GSMUA_Achr6P15230_001	Banana	plastid	69.21	68.85
EES18885	Sorghum	plastid	68.95	64.69
GSMUA_Achr8P20820_001	Banana	cytosol, plastid	70.79	64.51
GSMUA_Achr11P...	Banana	cytosol	62.89	63.9
GSMUA_Achr10P...	Banana	plastid	68.16	62.71
KRH15105	Soybean	cytosol, nucleus	62.63	62.47
KRH73031	Soybean	plastid	64.21	62.24
GSMUA_Achr10P...	Banana	plastid	68.16	62.11
GSMUA_Achr8P02170_001	Banana	plastid	61.58	62.07
VIT_13s0019g01080.t01	Wine grape	plastid	64.74	60.89
PGSC0003DMT400023009	Potato	cytosol, plastid	66.58	60.82
PGSC0003DMT400028591	Potato	plastid	66.05	60.77
VIT_08s0007g00420.t01	Wine grape	plastid	64.47	60.49
Solyc09g010850.2.1	Tomato	cytosol, plastid	66.05	60.34
Solyc10g084770.1.1	Tomato	cytosol, plastid	65.53	60.29
KRH75643	Soybean	plastid	64.21	59.08
KRG97912	Soybean	cytosol	60.0	59.07
KRH65832	Soybean	plastid	64.21	58.94
KRG99951	Soybean	plastid	63.42	58.78
EER93184	Sorghum	plastid	64.47	58.61
KRH49102	Soybean	plastid	62.63	58.05
Solyc05g053930.2.1	Tomato	plastid	62.37	57.95
Solyc04g011520.2.1	Tomato	nucleus	59.21	57.11
PGSC0003DMT400071329	Potato	plastid	58.95	56.85
EER92783	Sorghum	plastid	59.21	51.25
EER94269	Sorghum	plastid	57.37	50.35
EER95575	Sorghum	cytosol	51.05	49.74
KXG19409	Sorghum	mitochondrion	53.42	49.51
EER99941	Sorghum	plastid	51.84	48.17
EES04370	Sorghum	plastid	54.21	47.25
EER90433	Sorghum	plastid	51.32	46.54
KXG26902	Sorghum	cytosol	55.79	45.99
EES03187	Sorghum	cytosol	57.89	44.72
EER96629	Sorghum	cytosol	58.42	44.31
EES05745	Sorghum	cytosol	52.89	42.49
OQU78536	Sorghum	plasma membrane	56.05	34.86
KRH15106	Soybean	cytosol	1.05	23.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	EntrezGene:8081506	UniProt:C5WQ02
EnsemblPlants:EER92482	ProteinID:EER92482	ProteinID:EER92482.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF146	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G421300	SUPFAM:SSF56112
unigene:Sbi.8391	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82CE6	RefSeq:XP_002465484.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:70219353..70222534

Molecular Weight (calculated)

41568.5 Da

IEP (calculated)

9.627

GRAVY (calculated)

-0.404

Length

380 amino acids

Sequence
(BLAST)

001: MGNCAGVEGN AEINPSFSAP NSSGTGSKNS SKNATDTSTF GTKTSGSSSS VPPTPRTETE ILESSNVRKF TFSELKGSTR NFRPDSLLGE GGFGSVFKGW
101: MDERTLAPVK PGTGMIVAVK KLKLDSFQGH REWLAEVNYL GQLSHPNLVK LIGYCLEDEQ RLLVYEYMPR GSLEHHLFRR SSNFQPLPWN LRIKVALEAA
201: RGLAFLHGDQ AKVIYRDFKT SNILLDSEYN AKLADFGLAK DGPTGDKSHV STRVMGTQGY AAPEYLATGH LTAKSDVYSY GVVLLELLSG QRALDKNRPP
301: GQHNLVEWAR PYITNKRRVI HVLDSRLGSQ CSLPAAQKMA TLALQCLSMD ARGRPGMDQV VTVLEDLQEA KGSVKKLASK

Best Arabidopsis Sequence Match ( AT2G28930.1 )
(BLAST)

001: MKMGFVEKVK SNVFLYANYV FGCCIGASPK YMSSEANDSL GSKSSSVSIR TNPRTEGEIL QSPNLKSFTF AELKAATRNF RPDSVLGEGG FGSVFKGWID
101: EQTLTASKPG TGVVIAVKKL NQDGWQGHQE WLAEVNYLGQ FSHPNLVKLI GYCLEDEHRL LVYEFMPRGS LENHLFRRGS YFQPLSWTLR LKVALGAAKG
201: LAFLHNAETS VIYRDFKTSN ILLDSEYNAK LSDFGLAKDG PTGDKSHVST RIMGTYGYAA PEYLATGHLT TKSDVYSYGV VLLEVLSGRR AVDKNRPPGE
301: QKLVEWARPL LANKRKLFRV IDNRLQDQYS MEEACKVATL ALRCLTFEIK LRPNMNEVVS HLEHIQTLNE AGGRNIDMVQ RRMRRRSDSV AINQKPNAGF
401: ARQTAVGVIA TAYPRPSDSP LFV

Arabidopsis Description

APK1BAt2g28930 [Source:UniProtKB/TrEMBL;Acc:A1L4W8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.