CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	EES01631	AT2G41090.1	17360592
AT1G14370.1	EES09201	AT2G41090.1	17360592
AT1G14370.1	EES16322	AT2G41090.1	17360592
AT1G14370.1	OQU78227	AT2G41090.1	17360592
AT1G14370.1	EES01631	AT5G21274.1	17360592
AT1G14370.1	EES09201	AT5G21274.1	17360592
AT1G14370.1	EES16322	AT5G21274.1	17360592
AT1G14370.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048314_P001	Maize	cytosol, plastid	97.04	93.42
HORVU4Hr1G075150.2	Barley	plastid	83.83	88.25
TraesCS4B01G287300.1	Wheat	plastid	83.83	87.41
TraesCS4D01G286100.1	Wheat	plastid	83.83	87.41
TraesCS4A01G016800.1	Wheat	plastid	83.83	87.41
EER94269	Sorghum	plastid	76.08	77.14
VIT_01s0026g01880.t01	Wine grape	cytosol	68.79	71.9
GSMUA_Achr1P21600_001	Banana	plastid	67.2	71.43
KRH45870	Soybean	plastid	65.15	71.14
KRH74810	Soybean	cytosol, plastid	64.92	69.34
KRH69316	Soybean	cytosol, plastid	64.92	69.34
GSMUA_Achr2P07470_001	Banana	plastid	65.38	68.99
KRG99134	Soybean	plastid	65.38	68.99
AT2G02800.1	Thale cress	plastid	66.74	68.78
Bra019654.1-P	Field mustard	cytosol, plastid	65.38	68.33
CDY49086	Canola	cytosol, plastid	64.92	67.86
CDY39318	Canola	cytosol, plastid	64.92	67.7
Solyc05g007140.2.1	Tomato	plastid	64.24	67.14
PGSC0003DMT400002280	Potato	plastid	64.01	67.06
Solyc01g010660.2.1	Tomato	plastid	63.78	66.83
CDY45196	Canola	plastid	64.92	66.74
PGSC0003DMT400065801	Potato	plastid	63.78	66.67
CDY38760	Canola	plastid	59.68	66.5
CDY11655	Canola	plastid	59.68	66.5
Bra016265.1-P	Field mustard	plastid	59.68	66.5
CDY53554	Canola	plastid	64.92	66.43
AT1G69790.1	Thale cress	plastid	58.54	66.41
CDX81634	Canola	plastid	64.69	66.2
AT1G14370.1	Thale cress	plastid	64.01	65.96
GSMUA_Achr6P10640_001	Banana	plastid	60.59	65.84
Bra026834.1-P	Field mustard	plastid	64.46	65.81
CDY41675	Canola	plastid	65.83	65.09
CDY52768	Canola	plastid	59.0	65.08
CDY67404	Canola	plastid	65.83	64.94
CDY03036	Canola	plastid	65.38	64.93
AT1G26970.1	Thale cress	plastid	60.82	64.81
Bra016301.1-P	Field mustard	plastid	59.68	63.9
CDY46426	Canola	plastid	59.68	63.9
KRH56930	Soybean	cytosol	57.4	63.0
Bra026580.1-P	Field mustard	plastid	66.06	59.43
EER92482	Sorghum	plastid	51.25	59.21
EES18885	Sorghum	plastid	53.3	57.78
Solyc12g077390.1.1	Tomato	cytosol	54.44	57.04
EER93184	Sorghum	plastid	51.48	54.07
EER99941	Sorghum	plastid	49.89	53.55
GSMUA_Achr10P...	Banana	cytosol	67.43	52.02
KXG19409	Sorghum	mitochondrion	46.92	50.24
EER90433	Sorghum	plastid	47.15	49.4
EER95575	Sorghum	cytosol	42.6	47.95
EES04370	Sorghum	plastid	46.7	47.02
PGSC0003DMT400049853	Potato	plasma membrane	51.48	46.89
KXG26902	Sorghum	cytosol	46.92	44.69
EER96629	Sorghum	cytosol	49.43	43.31
EES03187	Sorghum	cytosol	48.52	43.29
EES05745	Sorghum	cytosol	46.01	42.71
OQU78536	Sorghum	plasma membrane	46.92	33.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EntrezGene:8059814	UniProt:C5WWR0	EnsemblPlants:EER92783
ProteinID:EER92783	ProteinID:EER92783.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF286	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	EnsemblPlantsGene:SORBI_3001G489300	SUPFAM:SSF56112	unigene:Sbi.1593
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82A59	RefSeq:XP_002465785.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:75969449..75973631

Molecular Weight (calculated)

47863.3 Da

IEP (calculated)

10.064

GRAVY (calculated)

-0.415

Length

439 amino acids

Sequence
(BLAST)

001: MGNCIDTTAR VDHSMNNAAY PSKVTSKTSL SSVPSTIKSN STRSTLTLPS MRDRSELPTP RTEGEILSSS NLKAFTFNDL KNATKNFRPD SLLGEGGFGH
101: VYKGWIDEHT LAPSRPGSGM VVAVKKLKPE GFQGHKEWLT EVDYLGQLHH KNLVKLIGYC SDGDNRLLVY EFMPKGSLEN HLFRRGADPL SWAIRLKVAI
201: GAARGLSFLH DAENQVIYRD FKASNILLDS EFNAKLSDFG LAKAGPTGDK THVSTQVMGT HGYAAPEYIA TGRLSAKADV YSFGVVLLEL LTGRRALDKS
301: KPGFEQNLVD WARPHLGDKR RLYRIMDTKL GGQYPKKGAN AIASIALQCI CGDAKLRPPM SQVLEELEQL QDAKYGSPSP LVDIRTASHA APKSPMSTTP
401: KSPMSTTPKS PMRVQPSPRR SLGAAAASPL AGYRTAQVH

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.