CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14370.1	KRG89812	AT2G41090.1	17360592
AT1G14370.1	KRG94975	AT2G41090.1	17360592
AT1G14370.1	KRH18664	AT2G41090.1	17360592
AT1G14370.1	KRG89812	AT5G21274.1	17360592
AT1G14370.1	KRG94975	AT5G21274.1	17360592
AT1G14370.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99134	Soybean	plastid	96.77	93.51
KRH69316	Soybean	cytosol, plastid	85.57	83.7
KRH74810	Soybean	cytosol, plastid	85.57	83.7
VIT_01s0026g01880.t01	Wine grape	cytosol	80.6	77.14
Solyc01g010660.2.1	Tomato	plastid	75.87	72.79
PGSC0003DMT400002280	Potato	plastid	75.37	72.31
PGSC0003DMT400065801	Potato	plastid	75.37	72.14
AT2G02800.1	Thale cress	plastid	75.87	71.6
Solyc05g007140.2.1	Tomato	plastid	74.63	71.43
Bra019654.1-P	Field mustard	cytosol, plastid	73.88	70.71
CDY49086	Canola	cytosol, plastid	73.38	70.24
CDY39318	Canola	cytosol, plastid	73.38	70.07
CDY45196	Canola	plastid	74.13	69.79
CDY53554	Canola	plastid	74.13	69.46
CDX81634	Canola	plastid	73.88	69.23
Bra026834.1-P	Field mustard	plastid	73.63	68.84
CDY67404	Canola	plastid	75.87	68.54
AT1G14370.1	Thale cress	plastid	72.39	68.31
CDY41675	Canola	plastid	75.37	68.24
CDY03036	Canola	plastid	74.38	67.65
HORVU4Hr1G075150.2	Barley	plastid	69.15	66.67
TraesCS4B01G287300.1	Wheat	plastid	69.65	66.51
TraesCS4A01G016800.1	Wheat	plastid	69.65	66.51
TraesCS4D01G286100.1	Wheat	plastid	69.65	66.51
Os10t0405100-02	Rice	plasma membrane	69.65	65.42
EER92783	Sorghum	plastid	71.14	65.15
GSMUA_Achr1P21600_001	Banana	plastid	66.42	64.65
EER94269	Sorghum	plastid	67.66	62.82
Zm00001d048314_P001	Maize	cytosol, plastid	70.9	62.5
Bra026580.1-P	Field mustard	plastid	75.87	62.5
Zm00001d033004_P004	Maize	plastid	67.66	62.39
KRH56930	Soybean	cytosol	61.94	62.25
GSMUA_Achr6P10640_001	Banana	plastid	62.19	61.88
GSMUA_Achr2P07470_001	Banana	plastid	63.18	61.06
KRH18652	Soybean	plastid	55.72	58.64
KRH07892	Soybean	cytosol	37.31	57.47
KRH73031	Soybean	plastid	55.97	57.4
KRG97912	Soybean	cytosol	54.23	56.48
KRH15105	Soybean	cytosol, nucleus	53.48	56.43
KRH14658	Soybean	plastid	54.23	56.04
KRG99951	Soybean	plastid	56.97	55.85
KRH23073	Soybean	cytosol, plastid	57.71	55.37
KRH49102	Soybean	plastid	55.47	54.39
KRH28911	Soybean	plastid	49.5	54.37
KRH65832	Soybean	plastid	55.72	54.11
KRH75643	Soybean	plastid	55.47	54.0
KRH10259	Soybean	plastid	56.22	52.44
KRG89785	Soybean	plasma membrane, vacuole	55.22	52.24
KRH39445	Soybean	plastid	50.99	51.64
KRH51603	Soybean	mitochondrion, plastid	47.01	51.22
KRH29797	Soybean	plastid	52.49	51.21
KRH60921	Soybean	cytosol	46.77	50.81
GSMUA_Achr10P...	Banana	cytosol	70.65	49.91
KRH28912	Soybean	plastid	49.5	49.14
KRH14015	Soybean	plastid	50.25	49.03
KRH74099	Soybean	plastid	50.0	48.79
KRH20145	Soybean	cytosol	52.24	48.05
KRH03664	Soybean	cytosol	52.49	47.95
KRH24792	Soybean	cytosol, plastid	52.99	46.0
KRH01126	Soybean	cytosol	53.73	45.57
KRH40135	Soybean	cytosol	53.73	45.57
KRG99168	Soybean	nucleus	54.23	44.76
KRH45845	Soybean	nucleus	53.48	44.15
KRH07902	Soybean	plastid	42.29	43.93
KRH07906	Soybean	plastid	45.52	43.88
KRG93494	Soybean	cytosol	52.99	43.74
KRH74775	Soybean	cytosol	53.23	43.58
KRH69360	Soybean	cytosol	53.73	42.52
KRH15106	Soybean	cytosol	1.74	41.18
KRH07896	Soybean	plastid	44.28	36.78

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100305401	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	EMBL:ACUP02005291	UniProt:C6ZRQ9
EMBL:FJ014749	EnsemblPlantsGene:GLYMA_08G297900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004675	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719
EnsemblPlants:KRH45870	ProteinID:KRH45870	ProteinID:KRH45870.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001B0701E	:

Description

hypothetical protein

Coordinates

chr8:-:41476347..41480135

Molecular Weight (calculated)

43988.5 Da

IEP (calculated)

10.140

GRAVY (calculated)

-0.394

Length

402 amino acids

Sequence
(BLAST)

001: MGNCLDSSAK VEAAHSSRTP SGISKTSPSS VPSNLSILSY SEASDFSNLP TPRSEGEILS SPNLKAFTFN ELKNATRNFR PDSLLGEGGF GYVYKGWIDE
101: HTFTASKPGS GMVVAVKKLK PEGLQGHKEW LTEVDYLGQL HHQNLVKLIG YCADGENRLL VYEFMSKGSL ENHLFRRGPQ PLSWSVRMKV AIGAARGLSF
201: LHNAKSQVIY RDFKASNILL DAEFNAKLSD FGLAKAGPTG DRTHVSTQVM GTQGYAAPEY VATGRLTAKS DVYSFGVVLL ELLSGRRAVD RSKAGVEQNL
301: VEWAKPYLGD KRRLFRIMDT KLGGQYPQKG AYMAATLALK CLNREAKGRP PITEVLQTLE QIAASKTAGR NSQLEQKRVH APVRKSSVQK GSHLNHTPTA
401: FP

Best Arabidopsis Sequence Match ( AT1G26970.1 )
(BLAST)

001: MGNCFGFSAK VGNRESPYRG SSRISAKRSQ SSRLSSLTIQ SSSYNDDTSV ASLQTPRSEG ELLASPTLKA FTFNELKTAT RNFRPDSVIG EGGFGYVYKG
101: WIDERTLSPS KPGSGMVVAV KKLKEEGFQG HRQWLAEVDC LGRLHHMNLV KLIGYCSKGD HIRLLVYEYM PKGSLENHLF RRGAEPIPWR TRIKVAIGAA
201: RGLAFLHEAQ VIYRDFKASN ILLDSEFNAK LSDFGLAKVG PTGDRTHVST QVMGTQGYAA PEYVATGRIT AKSDVYSFGV VLLELLSGRL TVDKTKVGVE
301: RNLVDWAIPY LGDKRKVFRI MDTKLGGQYP HKGACLTANT ALQCLNQEPK LRPKMSDVLS TLEELEMTLK SGSISNSVMK LTSSSSSFTA KQRVRTPVAD
401: PVLSSRRCRR VR

Arabidopsis Description

PBL4Probable serine/threonine-protein kinase PBL4 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP29]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.