CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX95314
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G02800.1	CDX73678	AT3G51920.1	17360592
AT2G02800.1	CDX95314	AT3G51920.1	17360592
AT2G02800.1	CDY23174	AT3G51920.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67404	Canola	plastid	98.2	97.98
CDY45196	Canola	plastid	91.44	95.08
AT2G02800.1	Thale cress	plastid	90.99	94.84
CDY03036	Canola	plastid	93.92	94.34
Bra026580.1-P	Field mustard	plastid	98.65	89.75
CDY53554	Canola	plastid	79.28	82.05
CDY49086	Canola	cytosol, plastid	77.48	81.9
CDX81634	Canola	plastid	79.05	81.82
CDY39318	Canola	cytosol, plastid	77.25	81.47
KRH74810	Soybean	cytosol, plastid	71.62	77.37
KRH69316	Soybean	cytosol, plastid	71.62	77.37
VIT_01s0026g01880.t01	Wine grape	cytosol	72.07	76.19
KRH45870	Soybean	plastid	68.24	75.37
Solyc05g007140.2.1	Tomato	plastid	70.27	74.29
PGSC0003DMT400002280	Potato	plastid	70.05	74.22
PGSC0003DMT400065801	Potato	plastid	70.05	74.05
Solyc01g010660.2.1	Tomato	plastid	69.82	73.99
KRG99134	Soybean	plastid	68.69	73.32
CDY38760	Canola	plastid	61.04	68.78
CDY11655	Canola	plastid	60.59	68.27
GSMUA_Achr1P21600_001	Banana	plastid	63.29	68.04
CDY52768	Canola	plastid	60.81	67.84
HORVU4Hr1G075150.2	Barley	plastid	63.06	67.15
TraesCS4D01G286100.1	Wheat	plastid	63.51	66.98
TraesCS4B01G287300.1	Wheat	plastid	63.51	66.98
TraesCS4A01G016800.1	Wheat	plastid	63.51	66.98
CDY46426	Canola	plastid	61.26	66.34
Os10t0405100-02	Rice	plasma membrane	63.74	66.12
EER92783	Sorghum	plastid	65.09	65.83
GSMUA_Achr2P07470_001	Banana	plastid	60.81	64.9
EER94269	Sorghum	plastid	62.84	64.43
Zm00001d033004_P004	Maize	plastid	62.84	63.99
Zm00001d048314_P001	Maize	cytosol, plastid	64.86	63.16
GSMUA_Achr6P10640_001	Banana	plastid	55.41	60.89
CDX76093	Canola	cytosol, plastid	46.4	58.86
CDY02940	Canola	cytosol	46.17	58.57
CDY10453	Canola	plastid	51.35	58.46
CDY40347	Canola	plastid	51.35	58.46
CDY06271	Canola	plastid	52.93	57.88
CDY48100	Canola	plastid	50.23	57.47
CDY09904	Canola	plastid	52.48	57.39
CDX95143	Canola	plastid	52.7	57.35
CDY06715	Canola	plastid	52.7	57.35
CDY04848	Canola	plastid	49.77	56.96
CDY39519	Canola	cytosol	50.23	56.31
CDY55560	Canola	plastid	49.55	56.27
CDX80814	Canola	plastid	49.55	56.27
CDY47885	Canola	plastid	51.35	55.21
CDY31741	Canola	cytosol, plastid	51.8	55.02
CDX77220	Canola	cytosol, plastid	51.8	55.02
CDY24954	Canola	plastid	48.2	54.45
CDY07022	Canola	plastid	46.62	54.33
CDY07643	Canola	plastid	47.97	54.2
CDX74847	Canola	cytosol	46.62	54.19
CDY20465	Canola	cytosol	46.85	53.89
CDX93249	Canola	plastid	46.17	53.52
CDY40221	Canola	plastid	46.17	53.39
CDX83305	Canola	plastid	48.42	53.22
CDX95754	Canola	plastid	48.2	52.97
GSMUA_Achr10P...	Banana	cytosol	63.74	49.74
CDY47489	Canola	plastid	45.05	48.54
CDY26797	Canola	plastid	44.82	47.84
CDY31372	Canola	plastid	44.14	47.8
CDX71350	Canola	plastid	43.92	47.56
CDY40618	Canola	plastid	41.44	47.3
CDY47249	Canola	cytosol	49.1	46.28
CDX72550	Canola	plastid	40.77	46.17
CDY04026	Canola	cytosol	48.65	45.57
CDY49042	Canola	cytosol	49.32	45.34
CDY59664	Canola	cytosol	48.65	45.09
CDY37534	Canola	nucleus	49.32	44.88
CDY28689	Canola	nucleus	48.42	44.15
CDY24816	Canola	cytosol, plastid	36.49	44.14
CDX78606	Canola	nucleus	50.0	44.05
CDX69153	Canola	plastid	42.57	43.95
CDX70589	Canola	nucleus	49.77	43.85
CDX75515	Canola	plastid	42.12	43.79
CDX72549	Canola	plastid	42.79	43.68
CDY41645	Canola	plastid	41.44	43.6
CDY24815	Canola	plastid	41.22	43.36
CDY40619	Canola	plastid	42.12	42.99
CDX87609	Canola	cytosol	41.89	41.43
CDX88265	Canola	cytosol	41.44	41.26
CDX85943	Canola	plastid	40.54	41.0
CDX68102	Canola	plastid	40.32	40.41
CDY00122	Canola	cytosol	47.97	28.98
CDY65043	Canola	cytosol	49.1	13.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	Gene3D:3.30.200.20	GO:A0A078HT07	UniProt:A0A078HT07	EnsemblPlants:CDY41675
ProteinID:CDY41675	ProteinID:CDY41675.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00073355001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF160	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE75E8	SEG:seg	:	:

Description

BnaC02g34790DBnaC02g34790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT07]

Coordinates

chrLK032503:+:67791..70210

Molecular Weight (calculated)

47868.9 Da

IEP (calculated)

10.217

GRAVY (calculated)

-0.383

Length

444 amino acids

Sequence
(BLAST)

001: MGNCLDSSAK VISSSHSPHA NSGSSGSRVS SKTSRSTVPS SLSINSYSSL ESLPTPRTEG EILSSPNLKA FTFSELKSAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGFQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE DRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDRTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGV
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDELESTT TTKPGGSGAR QGQIDSPRGS NGAGTRQGQI
401: DSPRGSNGSV VQKSPRRYSY DRPLLHLTPL ASPLPSHSQS PRVR

Best Arabidopsis Sequence Match ( AT2G02800.1 )
(BLAST)

001: MGNCLDSSAK VDSSSHSPHA NSASLSSRVS SKTSRSTVPS SLSINSYSSV ESLPTPRTEG EILSSPNLKA FTFNELKNAT RNFRPDSLLG EGGFGYVFKG
101: WIDGTTLTAS KPGSGIVVAV KKLKTEGYQG HKEWLTEVNY LGQLSHPNLV KLVGYCVEGE NRLLVYEFMP KGSLENHLFR RGAQPLTWAI RMKVAIGAAK
201: GLTFLHDAKS QVIYRDFKAA NILLDAEFNS KLSDFGLAKA GPTGDKTHVS TQVMGTHGYA APEYVATGRL TAKSDVYSFG VVLLELLSGR RAVDKSKVGM
301: EQSLVDWATP YLGDKRKLFR IMDTRLGGQY PQKGAYTAAS LALQCLNPDA KLRPKMSEVL AKLDQLESTK PGTGVGNRQA QIDSPRGSNG SIVQKSPRRY
401: SYDRPLLHIT PGASPLPTHN HSPRVR

Arabidopsis Description

PBL3Probable serine/threonine-protein kinase PBL3 [Source:UniProtKB/Swiss-Prot;Acc:O49840]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.