CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02940	Canola	cytosol	81.51	89.43
CDX76093	Canola	cytosol, plastid	81.25	89.14
AT3G55450.2	Thale cress	plasma membrane, plastid	87.24	78.64
CDY24954	Canola	plastid	75.0	73.28
CDY07643	Canola	plastid	74.48	72.77
CDY07022	Canola	plastid	72.14	72.7
CDX93249	Canola	plastid	72.14	72.32
CDX74847	Canola	cytosol	70.83	71.2
CDY20465	Canola	cytosol	71.09	70.73
CDY55560	Canola	plastid	58.85	57.8
CDX80814	Canola	plastid	58.07	57.03
CDY40347	Canola	plastid	57.55	56.67
CDY10453	Canola	plastid	57.29	56.41
CDY48100	Canola	plastid	56.77	56.19
CDY04848	Canola	plastid	56.51	55.93
CDY06715	Canola	plastid	58.33	54.9
CDX95143	Canola	plastid	57.81	54.41
CDY06271	Canola	plastid	57.03	53.94
CDY09904	Canola	plastid	57.03	53.94
CDY39519	Canola	cytosol	55.47	53.79
CDY47885	Canola	plastid	56.77	52.78
CDY31741	Canola	cytosol, plastid	57.03	52.39
CDX77220	Canola	cytosol, plastid	57.03	52.39
CDY52768	Canola	plastid	52.86	51.01
CDX95754	Canola	plastid	53.65	50.99
CDX83305	Canola	plastid	53.39	50.74
CDY38760	Canola	plastid	51.82	50.51
CDY11655	Canola	plastid	51.56	50.25
CDY49086	Canola	cytosol, plastid	53.91	49.29
CDY46426	Canola	plastid	52.34	49.02
CDY45196	Canola	plastid	53.65	48.24
CDY39318	Canola	cytosol, plastid	52.86	48.22
CDY53554	Canola	plastid	53.39	47.79
CDX81634	Canola	plastid	53.12	47.55
CDY03036	Canola	plastid	53.39	46.38
CDY67404	Canola	plastid	53.65	46.29
CDY41675	Canola	plastid	53.39	46.17
CDY31372	Canola	plastid	48.7	45.61
CDX71350	Canola	plastid	48.44	45.37
CDY47489	Canola	plastid	48.44	45.15
CDY40618	Canola	plastid	45.57	44.99
CDY26797	Canola	plastid	48.7	44.95
CDY24816	Canola	cytosol, plastid	42.19	44.14
CDY41645	Canola	plastid	48.44	44.08
CDY24815	Canola	plastid	48.18	43.84
CDX72550	Canola	plastid	44.53	43.62
CDX72549	Canola	plastid	48.7	42.99
CDY40619	Canola	plastid	48.44	42.76
CDX75515	Canola	plastid	46.61	41.92
CDX69153	Canola	plastid	46.88	41.86
CDY47249	Canola	cytosol	49.74	40.55
CDY59664	Canola	cytosol	50.52	40.5
CDY04026	Canola	cytosol	49.48	40.08
CDY28689	Canola	nucleus	50.26	39.63
CDY49042	Canola	cytosol	49.74	39.54
CDY37534	Canola	nucleus	49.74	39.14
CDX87609	Canola	cytosol	45.57	38.98
CDX78606	Canola	nucleus	51.04	38.89
CDX88265	Canola	cytosol	45.05	38.79
CDX70589	Canola	nucleus	50.78	38.69
CDX85943	Canola	plastid	43.75	38.27
CDX68102	Canola	plastid	44.01	38.15
CDY00122	Canola	cytosol	49.22	25.71
CDY65043	Canola	cytosol	51.3	12.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:A0A078HR96	UniProt:A0A078HR96
EnsemblPlants:CDY40221	ProteinID:CDY40221	ProteinID:CDY40221.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00069371001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF276	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDD970	SEG:seg

Description

BnaA09g35030DBnaA09g35030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR96]

Coordinates

chrLK032466:+:150768..153049

Molecular Weight (calculated)

42685.2 Da

IEP (calculated)

9.825

GRAVY (calculated)

-0.318

Length

384 amino acids

Sequence
(BLAST)

001: MGSCLSSRVN NKSSGLYDLH LSSVQSSSSA AHRREGEILS KANVKSFTFN ELKLATRNFR SDSVVGEGGF GSVYRGWIDE TTLAPTKSSS GLVIAVKRLN
101: PDGFQGHREW LTEINYLGQL SHPNLVKLIG YCLEDEQRLL VYEFMHKGSL EDHLFTTGVK CKPLSWTLRV KVALDAAKGL AFLHSDPVKV IYRDIKASNI
201: LLDSDFNGKL SDFGLARDGP MGETSYVSTR VMGTFGYAAP EYVSTGHLNA RSDVYSFGVV LLEILSGRRA LDHNRPAREH NLVDWARPYL ASRRKVLLIV
301: DSRLESQYKP EEAVRLASIA VQCISSEPKS RPTMDQVVRA LIQLQESMVK PAKVEPGKDT KKVVGLRTED KYQKKGFNKK TVGL

Best Arabidopsis Sequence Match ( AT3G55450.1 )
(BLAST)

001: MGSCLSSRVL NKSSSGLDDL HLSSCKSSSS ATAHKTEGEI LSSTTVKSFS FNELKLATRN FRSDSVVGEG GFGCVFRGWL DETTLTPTKS SSGLVIAVKR
101: LNPDGFQGHR EWLTEINYLG QLSHPNLVKL IGYCLEDEQR LLVYEFMHKG SLENHLFANG NKDFKPLSWI LRIKVALDAA KGLAFLHSDP VKVIYRDIKA
201: SNILLDSDFN AKLSDFGLAR DGPMGEQSYV STRVMGTFGY AAPEYVSTGH LNARSDVYSF GVVLLELLCG RQALDHNRPA KEQNLVDWAR PYLTSRRKVL
301: LIVDTRLNSQ YKPEGAVRLA SIAVQCLSFE PKSRPTMDQV VRALVQLQDS VVKPANVDPL KVKDTKKLVG LKTEDKYQRN GLNKKTVGL

Arabidopsis Description

PBL1PBS1-like 1 [Source:UniProtKB/TrEMBL;Acc:F4IWV6]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.