CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005716.1-P	Field mustard	plastid	99.49	99.49
CDX80814	Canola	plastid	98.72	98.72
CDY10453	Canola	plastid	87.98	88.21
CDY48100	Canola	plastid	87.47	88.14
CDY40347	Canola	plastid	87.72	87.95
CDY04848	Canola	plastid	86.96	87.63
AT5G02290.1	Thale cress	plastid	86.19	86.63
CDX95143	Canola	plastid	63.94	61.27
CDY06715	Canola	plastid	63.94	61.27
CDX76093	Canola	cytosol, plastid	54.73	61.14
CDY02940	Canola	cytosol	54.48	60.86
CDY06271	Canola	plastid	63.17	60.84
CDY09904	Canola	plastid	62.66	60.34
CDY39519	Canola	cytosol	60.61	59.85
CDY47885	Canola	plastid	63.17	59.81
CDY31741	Canola	cytosol, plastid	63.43	59.33
CDX77220	Canola	cytosol, plastid	63.43	59.33
CDY07022	Canola	plastid	57.8	59.32
CDY40221	Canola	plastid	57.8	58.85
CDX93249	Canola	plastid	57.29	58.49
CDX74847	Canola	cytosol	56.27	57.59
CDY07643	Canola	plastid	57.8	57.51
CDY24954	Canola	plastid	57.54	57.25
CDY20465	Canola	cytosol	55.5	56.22
CDX95754	Canola	plastid	58.06	56.19
CDX83305	Canola	plastid	58.06	56.19
CDY38760	Canola	plastid	53.2	52.79
CDY11655	Canola	plastid	52.94	52.54
CDY52768	Canola	plastid	53.2	52.26
CDY49086	Canola	cytosol, plastid	56.01	52.14
CDY53554	Canola	plastid	56.78	51.75
CDX81634	Canola	plastid	56.52	51.52
CDY39318	Canola	cytosol, plastid	54.99	51.07
CDY46426	Canola	plastid	53.45	50.98
CDY45196	Canola	plastid	54.73	50.12
CDY41675	Canola	plastid	56.27	49.55
CDY67404	Canola	plastid	56.01	49.21
CDY03036	Canola	plastid	54.73	48.42
CDY47489	Canola	plastid	49.87	47.33
CDY31372	Canola	plastid	49.62	47.32
CDY26797	Canola	plastid	50.13	47.12
CDX71350	Canola	plastid	49.36	47.07
CDY40618	Canola	plastid	45.78	46.02
CDX72550	Canola	plastid	45.01	44.9
CDY24815	Canola	plastid	47.31	43.84
CDY41645	Canola	plastid	47.31	43.84
CDX75515	Canola	plastid	47.57	43.56
CDX72549	Canola	plastid	48.08	43.22
CDX69153	Canola	plastid	47.31	43.02
CDY49042	Canola	cytosol	52.94	42.86
CDY59664	Canola	cytosol	52.43	42.8
CDY40619	Canola	plastid	47.57	42.76
CDY24816	Canola	cytosol, plastid	39.9	42.51
CDY47249	Canola	cytosol	51.15	42.46
CDY37534	Canola	nucleus	52.94	42.42
CDY28689	Canola	nucleus	52.69	42.3
CDY04026	Canola	cytosol	50.9	41.98
CDX78606	Canola	nucleus	53.71	41.67
CDX87609	Canola	cytosol	47.83	41.65
CDX70589	Canola	nucleus	53.45	41.47
CDX88265	Canola	cytosol	47.06	41.26
CDX85943	Canola	plastid	45.52	40.55
CDX68102	Canola	plastid	45.52	40.18
CDY00122	Canola	cytosol	51.41	27.35
CDY65043	Canola	cytosol	53.96	13.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:26.8.1.1.3	Gene3D:3.30.200.20	GO:A0A078IYW4	UniProt:A0A078IYW4
EnsemblPlants:CDY55560	ProteinID:CDY55560	ProteinID:CDY55560.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00017028001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF276	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDC499	SEG:seg

Description

BnaA03g54910DBnaA03g54910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYW4]

Coordinates

chrLK033412:+:57476..59280

Molecular Weight (calculated)

43837.4 Da

IEP (calculated)

9.787

GRAVY (calculated)

-0.461

Length

391 amino acids

Sequence
(BLAST)

001: MGACFSNRIK TDIASSTWLS SRFLSRDGSK GSSSTSFSHV PRTEGEILQN ANLKSFTLSE LKSATRNFRL DSMVGEGGFG RVFKGWIDET SLAPCKPGTG
101: LVIAVKKLNQ EGLQGHREWL AEINYLGQLN HPNLVKLIGY CLDEEQRLLV YEFMPRGSLE NHLFRRGTFY QPLPWNTRVR MALGAARGLA FLHNAQPQVI
201: YRDVKASNIL LDSNYRAKLS DFGLARDGPM GDKSYVSTRI MGTQGYAAPE YLSTGHLSAK NDVYSFGVVL LELLSGRRAI DRNQPAGEHN LLDWAKPYLV
301: NKRRLLRVMD PRLQGQYSLT RASKIALLAL DCISIDAKSR PDMKDVVKTL EELHVQKETP KEEEQNLQPS SDNNNNNKSP QAVNYPRPSI M

Best Arabidopsis Sequence Match ( AT1G07570.1 )
(BLAST)

001: MGICLSAQVK AESSGASTKY DAKDIGSLGS KASSVSVRPS PRTEGEILQS PNLKSFSFAE LKSATRNFRP DSVLGEGGFG CVFKGWIDEK SLTASRPGTG
101: LVIAVKKLNQ DGWQGHQEWL AEVNYLGQFS HRHLVKLIGY CLEDEHRLLV YEFMPRGSLE NHLFRRGLYF QPLSWKLRLK VALGAAKGLA FLHSSETRVI
201: YRDFKTSNIL LDSEYNAKLS DFGLAKDGPI GDKSHVSTRV MGTHGYAAPE YLATGHLTTK SDVYSFGVVL LELLSGRRAV DKNRPSGERN LVEWAKPYLV
301: NKRKIFRVID NRLQDQYSME EACKVATLSL RCLTTEIKLR PNMSEVVSHL EHIQSLNAAI GGNMDKTDRR MRRRSDSVVS KKVNAGFARQ TAVGSTVVAY
401: PRPSASPLYV

Arabidopsis Description

APK1AProtein kinase superfamily protein [Source:TAIR;Acc:AT1G07570]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.