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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX92649
CDY02176
CDY03427
CDY08946
CDY11029
CDY23090
CDY24845
CDY34302

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G15080.1 CDX92649 AT4G24690.1 21798944
AT5G15080.1 CDY03427 AT4G24690.1 21798944
AT5G15080.1 CDY08946 AT4G24690.1 21798944
AT5G15080.1 CDY11029 AT4G24690.1 21798944
AT5G15080.1 CDY24845 AT4G24690.1 21798944
AT5G15080.1 CDY34302 AT4G24690.1 21798944
AT5G15080.1 CDY02176 AT5G61010.1 21798944
AT5G15080.1 CDY23090 AT5G61010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006278.1-P Field mustard nucleus 100.0 100.0
CDX70589 Canola nucleus 98.81 98.81
AT5G15080.1 Thale cress cytosol 88.49 90.47
CDY59664 Canola cytosol 81.55 85.8
CDY49042 Canola cytosol 81.35 84.89
CDY37534 Canola nucleus 81.55 84.22
CDY28689 Canola nucleus 81.35 84.19
Os09t0361100-01 Rice cytosol, plasma membrane 59.33 77.86
PGSC0003DMT400045429 Potato cytosol 72.62 76.73
Solyc05g007050.2.1 Tomato cytosol 72.42 76.36
GSMUA_AchrUn_... Banana plastid 65.48 75.86
PGSC0003DMT400002229 Potato cytosol 72.42 75.73
Solyc01g010780.2.1 Tomato cytosol 71.63 75.05
CDY47249 Canola cytosol 66.87 71.55
CDY04026 Canola cytosol 66.67 70.89
KRH01126 Soybean cytosol 66.27 70.46
KRH40135 Soybean cytosol 66.07 70.25
TraesCS3B01G241300.1 Wheat cytosol 65.67 69.39
TraesCS3A01G210700.1 Wheat cytosol 65.48 69.18
TraesCS3D01G213600.1 Wheat cytosol 65.28 68.97
HORVU3Hr1G051080.3 Barley cytosol 65.87 67.89
EES03187 Sorghum cytosol 66.07 67.68
Os01t0588500-01 Rice plasma membrane 66.27 67.61
KRG93494 Soybean cytosol 65.28 67.56
Zm00001d044324_P001 Maize cytosol 66.07 66.33
TraesCS5D01G195800.2 Wheat cytosol 65.08 65.73
TraesCS5A01G193300.2 Wheat cytosol 65.08 65.73
EER96629 Sorghum cytosol 64.88 65.27
Zm00001d020213_P003 Maize cytosol 64.88 64.88
Zm00001d005647_P002 Maize cytosol 63.89 63.64
TraesCS5B01G188700.1 Wheat cytosol 64.68 63.18
HORVU5Hr1G056920.1 Barley cytosol 64.88 62.4
CDY40347 Canola plastid 43.25 55.9
CDY10453 Canola plastid 43.25 55.9
CDY02940 Canola cytosol 38.1 54.86
CDY48100 Canola plastid 41.87 54.38
CDX93249 Canola plastid 41.07 54.05
CDX76093 Canola cytosol, plastid 37.5 54.0
CDY04848 Canola plastid 41.47 53.87
CDY07022 Canola plastid 40.67 53.81
CDX80814 Canola plastid 41.67 53.71
CDY55560 Canola plastid 41.67 53.71
CDY06271 Canola plastid 42.66 52.96
CDX74847 Canola cytosol 40.08 52.88
CDY20465 Canola cytosol 40.48 52.85
CDY39519 Canola cytosol 41.47 52.78
CDY06715 Canola plastid 42.66 52.7
CDY09904 Canola plastid 42.26 52.46
CDX95143 Canola plastid 42.46 52.45
CDX77220 Canola cytosol, plastid 43.25 52.15
CDY31741 Canola cytosol, plastid 43.25 52.15
CDY47885 Canola plastid 42.66 52.06
CDY45196 Canola plastid 43.85 51.76
CDY49086 Canola cytosol, plastid 43.06 51.67
CDY24954 Canola plastid 40.08 51.4
CDY07643 Canola plastid 40.08 51.4
CDX81634 Canola plastid 43.65 51.28
CDY53554 Canola plastid 43.65 51.28
CDY39318 Canola cytosol, plastid 42.66 51.07
CDY40221 Canola plastid 38.89 51.04
CDY52768 Canola plastid 40.28 51.01
CDX83305 Canola plastid 40.67 50.74
CDX95754 Canola plastid 40.48 50.49
CDY38760 Canola plastid 39.29 50.25
CDY03036 Canola plastid 44.05 50.23
CDY11655 Canola plastid 39.09 50.0
CDY41675 Canola plastid 44.05 50.0
CDY67404 Canola plastid 44.05 49.89
CDY46426 Canola plastid 40.28 49.51
CDY31372 Canola plastid 38.49 47.32
CDX71350 Canola plastid 38.49 47.32
CDY47489 Canola plastid 38.49 47.09
CDY26797 Canola plastid 38.49 46.63
CDY40618 Canola plastid 35.32 45.76
CDY00122 Canola cytosol 66.07 45.31
CDX72550 Canola plastid 34.33 44.13
CDY41645 Canola plastid 36.9 44.08
CDY24815 Canola plastid 36.9 44.08
CDX75515 Canola plastid 37.3 44.03
CDX69153 Canola plastid 37.5 43.95
CDX72549 Canola plastid 37.3 43.22
CDY24816 Canola cytosol, plastid 31.35 43.05
CDY40619 Canola plastid 36.9 42.76
CDX87609 Canola cytosol 36.71 41.2
CDX85943 Canola plastid 35.71 41.0
CDX88265 Canola cytosol 36.11 40.81
CDX68102 Canola plastid 35.71 40.63
CDY65043 Canola cytosol 84.33 26.88
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.37.1Gene3D:3.30.200.20GO:A0A078CN63EnsemblPlants:CDX78606ProteinID:CDX78606
ProteinID:CDX78606.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00130019001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714PIRSF:PIRSF000615ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF507InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
UniParc:UPI000253FBB7SEG:seg::::
Description
BnaA03g05180D
Coordinates
chrLK031815:+:1494094..1496766
Molecular Weight (calculated)
55768.1 Da
IEP (calculated)
9.489
GRAVY (calculated)
-0.618
Length
504 amino acids
Sequence
(BLAST)
001: MGLNDTDPVK AQSKKKPNEA EHQKRKKNDV VSKSKGETFD EEDEEREEPS GCWVKFRFMI GCLPSKSDLD ASSSSLYATT STVTTMESKS ANEKSTDQPA
101: GPVSSTTTTS NAGSSSSTPM ISEELKAYSN LRNFTFNDLK LATRNFRPES LLGEGGFGCV FKGWIEENGT APVKPGTGLT VAVKTLNPDG LQGHKEWLAE
201: INFLGNLLHP NLVKLVGYCI EDDQRLLVYE FMPRGSLENH LFRRSLPLPW SIRMKIAVGA AKGLSFLHEE ALKPVIYRDF KTSNILLDAD YNAKLSDFGL
301: AKDAPDEGKT HVSTRVMGTY GYAAPEYVMT GHLTSKSDVY SFGVVLLEML TGRRSMDKNR PNGEHNLVEW ARPHLLDKRR FYRLLDPRLE GHFSIKGAQK
401: VTQLAAQCLS RDPKVRPKMS DVVEALKPLP HLKDMASSSY YFQTMQAERL KNGSSRSQGG GNGFGSRNGQ PQPVFRTLSS PHGQHGSSPY RHQVPSPKPK
501: GATT
Best Arabidopsis Sequence Match ( AT5G15080.1 )
(BLAST)
001: MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP SKSDLDASSS SIYGSNCTVT TMESKSANEK SNDQPVGQVS
101: STTTTSNAES SSSTPVISEE LNISSHLRKF TFNDLKLSTR NFRPESLLGE GGFGCVFKGW IEENGTAPVK PGTGLTVAVK TLNPDGLQGH KEWLAEINFL
201: GNLLHPNLVK LVGYCIEDDQ RLLVYEFMPR GSLENHLFRR SLPLPWSIRM KIALGAAKGL SFLHEEALKP VIYRDFKTSN ILLDADYNAK LSDFGLAKDA
301: PDEGKTHVST RVMGTYGYAA PEYVMTGHLT SKSDVYSFGV VLLEMLTGRR SMDKNRPNGE HNLVEWARPH LLDKRRFYRL LDPRLEGHFS IKGAQKVTQL
401: AAQCLSRDPK IRPKMSDVVE ALKPLPHLKD MASSSYYFQT MQAERLKNGS GRSQGFGSRN GQHQPVFRTL SSPHGSSPYR HQIPSPKPKG ATT
Arabidopsis Description
PIX7Probable serine/threonine-protein kinase PIX7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.