CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX68084	plasma membrane
CDX68762	plasma membrane
CDX68998
CDX73930	plasma membrane
CDX73983	plasma membrane
CDX75374
CDX79885
CDX82311
CDX85273	plasma membrane
CDX85974	plasma membrane
CDX86365	plasma membrane
CDX87282
CDX87827	plasma membrane
CDX90458
CDX91635	plasma membrane
CDX92303
CDX95464
CDX97807
CDX99267
CDY00666	plasma membrane
CDY00928	plasma membrane
CDY02822	plasma membrane
CDY02823	plasma membrane
CDY03047
CDY03828
CDY03843
CDY04082	plasma membrane
CDY04780
CDY06667	plasma membrane
CDY06733
CDY07931	plasma membrane
CDY08608	plasma membrane
CDY09359
CDY09609
CDY10240	plasma membrane
CDY10748
CDY12506
CDY13565	plasma membrane
CDY15010
CDY17072
CDY18568
CDY21393
CDY22856	plasma membrane
CDY22990
CDY23303	plasma membrane
CDY23989
CDY25756
CDY26353
CDY27076	plasma membrane
CDY28047
CDY29659
CDY35934
CDY36434	plasma membrane
CDY37526
CDY37561
CDY39742
CDY40953
CDY41108
CDY41338	plasma membrane
CDY41685
CDY43407
CDY43917	plasma membrane
CDY43918	plasma membrane
CDY44387	plasma membrane
CDY45206
CDY45389
CDY45948	plasma membrane
CDY45950	plasma membrane
CDY46888
CDY47131
CDY47573
CDY47586
CDY49049
CDY52676
CDY52677
CDY53501
CDY55664	plasma membrane
CDY56705	plasma membrane
CDY58956
CDY60022	plasma membrane
CDY60850	plasma membrane
CDY65103
CDY65104
CDY65105
CDY70944	plasma membrane
CDY71325	plasma membrane
CDY72037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G61010.1	CDY06667	AT1G07000.1	24307681
AT5G61010.1	CDY10240	AT1G07000.1	24307681
AT5G61010.1	CDY04780	AT1G22840.1	21798944
AT5G61010.1	CDY12506	AT1G22840.1	21798944
AT5G61010.1	CDY21393	AT1G22840.1	21798944
AT5G61010.1	CDY25756	AT1G22840.1	21798944
AT5G61010.1	CDY06733	AT1G47510.1	21798944
AT5G61010.1	CDY17072	AT1G47510.1	21798944
AT5G61010.1	CDX87827	AT1G51640.1	24307681
AT5G61010.1	CDY22856	AT1G51640.1	24307681
AT5G61010.1	CDY43917	AT1G51640.1	24307681
AT5G61010.1	CDY43918	AT1G51640.1	24307681
AT5G61010.1	CDY55664	AT1G51640.1	24307681
AT5G61010.1	CDY71325	AT1G51640.1	24307681
AT5G61010.1	CDY03828	AT1G61340.1	21798944
AT5G61010.1	CDY15010	AT1G61340.1	21798944
AT5G61010.1	CDY40953	AT1G61340.1	21798944
AT5G61010.1	CDY47573	AT1G61340.1	21798944
AT5G61010.1	CDY72037	AT1G61340.1	21798944
AT5G61010.1	CDY03843	AT1G61590.1	21798944
AT5G61010.1	CDY26353	AT1G61590.1	21798944
AT5G61010.1	CDY47586	AT1G61590.1	21798944
AT5G61010.1	CDY52676	AT1G61590.1	21798944
AT5G61010.1	CDY52677	AT1G61590.1	21798944
AT5G61010.1	CDY65103	AT1G61590.1	21798944
AT5G61010.1	CDY65104	AT1G61590.1	21798944
AT5G61010.1	CDY65105	AT1G61590.1	21798944
AT5G61010.1	CDX68084	AT1G76850.1	24307681
AT5G61010.1	CDX85974	AT1G76850.1	24307681
AT5G61010.1	CDY13565	AT1G76850.1	24307681
AT5G61010.1	CDY45948	AT1G76850.1	24307681
AT5G61010.1	CDY45950	AT1G76850.1	24307681
AT5G61010.1	CDX87282	AT1G79910.1	21798944
AT5G61010.1	CDY37561	AT1G79910.1	21798944
AT5G61010.1	CDY41108	AT1G79910.1	21798944
AT5G61010.1	CDY03047	AT2G02560.1	21798944
AT5G61010.1	CDY09359	AT2G02560.1	21798944
AT5G61010.1	CDY41685	AT2G02560.1	21798944
AT5G61010.1	CDY45206	AT2G02560.1	21798944
AT5G61010.1	CDX97807	AT2G30580.1	21798944
AT5G61010.1	CDY10748	AT2G30580.1	21798944
AT5G61010.1	CDY23989	AT2G30580.1	21798944
AT5G61010.1	CDY29659	AT2G30580.1	21798944
AT5G61010.1	CDY47131	AT2G30580.1	21798944
AT5G61010.1	CDX79885	AT2G42260.1	21798944
AT5G61010.1	CDY53501	AT2G42260.1	21798944
AT5G61010.1	CDY37526	AT3G01370.1	21798944
AT5G61010.1	CDY49049	AT3G01370.1	21798944
AT5G61010.1	CDY28047	AT3G07480.1	21798944
AT5G61010.1	CDY35934	AT3G07480.1	21798944
AT5G61010.1	CDY43407	AT3G07480.1	21798944
AT5G61010.1	CDX73983	AT3G09530.1	24307681
AT5G61010.1	CDY07931	AT3G09530.1	24307681
AT5G61010.1	CDX73930	AT3G10380.1	24307681
AT5G61010.1	CDY00666	AT3G10380.1	24307681
AT5G61010.1	CDY00928	AT3G10380.1	24307681
AT5G61010.1	CDY08608	AT3G10380.1	24307681
AT5G61010.1	CDY41338	AT3G10380.1	24307681
AT5G61010.1	CDY56705	AT3G10380.1	24307681
AT5G61010.1	CDY46888	AT3G17668.1	21798944
AT5G61010.1	CDX82311	AT3G19100.1	21798944
AT5G61010.1	CDX92303	AT3G19100.1	21798944
AT5G61010.1	CDX95464	AT3G19100.1	21798944
AT5G61010.1	CDX99267	AT3G19100.1	21798944
AT5G61010.1	CDY18568	AT3G19100.1	21798944
AT5G61010.1	CDY22990	AT3G19100.1	21798944
AT5G61010.1	CDX85273	AT3G29400.1	24307681
AT5G61010.1	CDX86365	AT3G29400.1	24307681
AT5G61010.1	CDY04082	AT3G29400.1	24307681
AT5G61010.1	CDY44387	AT3G29400.1	24307681
AT5G61010.1	CDX90458	AT4G17680.1	21798944
AT5G61010.1	CDY09609	AT4G17680.1	21798944
AT5G61010.1	CDX68762	AT4G31540.1	24307681
AT5G61010.1	CDY23303	AT4G31540.1	24307681
AT5G61010.1	CDY36434	AT4G31540.1	24307681
AT5G61010.1	CDY60850	AT4G31540.1	24307681
AT5G61010.1	CDX68998	AT4G33690.1	21798944
AT5G61010.1	CDX75374	AT4G33690.1	21798944
AT5G61010.1	CDY39742	AT5G41370.1	21798944
AT5G61010.1	CDY45389	AT5G41370.1	21798944
AT5G61010.1	CDY58956	AT5G41370.1	21798944
AT5G61010.1	CDX91635	AT5G52340.1	24307681
AT5G61010.1	CDY27076	AT5G52340.1	24307681
AT5G61010.1	CDY02822	AT5G58430.1	24307681
AT5G61010.1	CDY02823	AT5G58430.1	24307681
AT5G61010.1	CDY60022	AT5G58430.1	24307681
AT5G61010.1	CDY70944	AT5G58430.1	24307681

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02176	Canola	cytosol	55.44	94.55
AT5G61010.1	Thale cress	cytosol	53.2	78.09
VIT_17s0000g07350.t01	Wine grape	cytosol	31.56	46.03
KRH63230	Soybean	cytosol	28.36	42.22
KRH54704	Soybean	cytosol	27.19	40.41
PGSC0003DMT400063083	Potato	cytosol	26.76	39.53
Solyc03g115070.1.1	Tomato	cytosol	26.44	39.06
CDY28574	Canola	cytosol	10.87	37.78
CDY44387	Canola	cytosol	22.81	37.41
CDY04082	Canola	cytosol	22.81	37.35
CDY02484	Canola	cytosol	11.94	37.09
GSMUA_Achr4P23470_001	Banana	cytosol	23.13	36.35
CDX86365	Canola	cytosol	24.84	36.01
CDX85273	Canola	cytosol	24.73	35.69
GSMUA_Achr7P00520_001	Banana	cytosol	22.92	35.48
KXG33434	Sorghum	peroxisome	21.96	33.99
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	21.86	33.94
TraesCS3A01G302600.1	Wheat	peroxisome	21.64	33.89
TraesCS3B01G333800.1	Wheat	cytosol	21.64	33.89
TraesCS3D01G299200.1	Wheat	peroxisome	21.54	33.72
HORVU3Hr1G073910.1	Barley	cytosol	21.32	33.39
CDX97230	Canola	cytosol	6.61	32.8
CDX69666	Canola	cytosol	6.61	32.8
Zm00001d043365_P001	Maize	peroxisome	21.75	31.92
Os01t0763750-01	Rice	cytosol	20.47	31.89
CDY02822	Canola	cytosol	9.28	30.21
CDX71629	Canola	cytosol	21.22	29.79
CDY05812	Canola	cytosol, plastid	21.22	29.7
CDY61474	Canola	cytosol	15.14	27.95
CDX68265	Canola	cytosol	18.02	27.75
CDY60968	Canola	cytosol	3.09	27.62
CDY50639	Canola	cytosol	17.91	27.59
CDX97543	Canola	cytoskeleton, cytosol, nucleus	18.12	27.51
CDY10372	Canola	cytosol	8.64	27.0
CDY10374	Canola	cytosol	17.8	26.18
CDY52262	Canola	cytoskeleton, cytosol, nucleus	18.02	26.16
CDX70300	Canola	cytosol	17.48	25.95
CDX93621	Canola	cytosol	12.37	25.84
CDX91635	Canola	cytosol	17.27	25.63
CDY27076	Canola	cytosol	17.27	25.63
CDY49576	Canola	cytosol	14.93	25.41
CDY10240	Canola	cytosol	15.99	25.13
CDY06667	Canola	cytosol	15.88	24.96
CDX88720	Canola	plastid	14.61	24.91
CDY44373	Canola	cytosol	14.82	24.69
CDY68540	Canola	plastid	14.39	24.64
CDY60562	Canola	cytosol	14.5	24.59
CDX78509	Canola	nucleus	16.42	24.56
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	14.5	24.5
CDY60022	Canola	cytosol	16.1	24.43
CDY69943	Canola	cytosol	16.31	24.4
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	10.23	24.24
CDX80235	Canola	cytosol, nucleus, plastid	15.88	23.8
CDX93267	Canola	plastid	14.93	23.33
CDY41604	Canola	cytosol	15.35	23.26
CDX95128	Canola	cytosol, nucleus, plastid	14.18	22.89
CDY44712	Canola	cytosol	14.93	22.8
CDY41297	Canola	mitochondrion	14.71	22.7
CDX69615	Canola	cytosol, nucleus, plastid	16.52	22.63
CDY09840	Canola	cytosol, nucleus, plastid	16.52	22.59
CDX70532	Canola	nucleus	16.42	22.58
CDX85618	Canola	nucleus	16.74	22.49
CDY40204	Canola	plastid	14.93	22.44
CDY44645	Canola	plastid	15.35	22.36
CDX74849	Canola	plastid	14.93	22.26
CDY64629	Canola	plastid	15.25	22.24
CDX78551	Canola	nucleus	16.1	22.17
CDX73983	Canola	mitochondrion	14.5	21.94
CDY04577	Canola	plastid	12.69	21.92
CDX73400	Canola	plastid	14.61	21.85
CDY64627	Canola	plastid	15.03	21.83
CDY07931	Canola	cytosol	14.5	21.73
CDX76117	Canola	plastid	14.61	21.64
CDX74848	Canola	plastid	14.07	21.64
CDX77195	Canola	mitochondrion, plastid	13.33	21.4
CDY02916	Canola	plastid	14.39	21.33
CDY31722	Canola	mitochondrion, plastid	13.22	21.31
CDY70944	Canola	cytosol	9.49	20.99
CDX74850	Canola	plastid	14.93	20.77
CDY44646	Canola	cytosol	15.14	20.34
CDY60967	Canola	plastid	8.1	19.84
CDX91088	Canola	cytosol, nucleus, vacuole	15.67	19.04
CDY02823	Canola	cytosol	4.9	18.47

Protein Annotations

MapMan:16.12.5.2	MapMan:22.6.3.1	Gene3D:3.30.70.330	GO:A0A078G9J0	UniProt:A0A078G9J0	EnsemblPlants:CDY23090
ProteinID:CDY23090	ProteinID:CDY23090.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00021567001
InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFAM:PF03081	PFscan:PS50102
PANTHER:PTHR12542	PANTHER:PTHR12542:SF49	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928
SUPFAM:SSF74788	UniParc:UPI0004EE974A	SEG:seg	:	:	:

Description

BnaC07g30970DBnaC07g30970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9J0]

Coordinates

chrLK032139:-:549815..554472

Molecular Weight (calculated)

101508.0 Da

IEP (calculated)

5.336

GRAVY (calculated)

-0.242

Length

938 amino acids

Sequence
(BLAST)

001: MAGLESKLPV VPGVKNHVLE ACHHVVKALR ASDNNLDPNL TKLLSDLESH LSTLEIVDTK VVVEDTGFSE IKKKFKEAKK VILGWEQNQS MILEAGVSKA
101: KADLFFQALH DVQRVLTSFK ALPIRTNKKE KDVYNQAAVV LDIAMFRLEK ELCDVLNQYK QHVQPQYLSV SSRGKDIVYD ESFVSLDDVV VEATDDQQIL
201: GSNNVVLLDP LVIPHIKAIA KAMFACDYGQ AFCEAFITVR RDALDEYMST TLEMERFSCV DVLGMQWEDL NGEMRKWTKV LKIVTLVYLA SEKQLCDKIL
301: VDFEPSSAAC FVEISKDTVL SLLAFGEAVS LRSCQPEMLE RFLGMYEVSA ELLLDVDNLF GDETGSFLRM AFHELAKTLA DRTVATFSTF KNAIASDEST
401: RAFSGGGIHH LTRYVMNYLK LLPEYKDALN TLLGNMQVDD SIPEKTGQDI LPSTFSPMAR HLRSIVTALE STLERKAQLY AEEPLKYIFL MNNCHYMVQK
501: VKTSELRHFF GDEWIRKHIA SYQHNVTDYE RATWSSVLSL LKDNSKDSVS TSRDRCRLFC LAFDDVYKNQ TRWSVPDPEL RDDLHISTSV KVVQSYRGFL
601: GRNAAGIGGK HVRYTCEDIE SLLLDLFECL PSPRSLRSSQ YLKAMAFLSK LGNILKQTNA KGSLSTSPSL FQAIRCMSSS KLFIGGMEYG MNEDSLREAF
701: SKYGEVVETR VILDRETGRS RGFGFVTFTS TEAASSAIQA LDGQDLHGRI VKVNYAHDRT SGGGYGGGGG GGYGGGGGYG GGSGGYGSGA SGGGYGSGTG
801: GYGGGYGASG GYGSSGSGYG EGSTASAGAV GGYGEGSAAS AGAVGGYNGS NGYGEGSTAS AGDVGGYNGS SGYATGNTYG SNNGGFAGEN QFGGNPVGNS
901: SQFGVGGEAQ FGSSMEKPEM MNGPVGDFED DTDVAKRA

Best Arabidopsis Sequence Match ( AT5G61010.1 )
(BLAST)

001: MAEFDSKVPV SGMNNHVFEA CHHVVKALRA SDNNLDANLR KLLSDLEMHL STFGIADTKV EDAGFSEIKK RFKEAVKRIR SWETNQSTMF EAGLSEADQF
101: FQALYDVQTV LVGFKALPMK TNQMEKDVYN QATVALDIAM LRLEKELCDV LHQHKRHVQP DYLAVSSRRK DIVYDESFVS LDDEVIVEAS SHEDDEQISD
201: FYNSDLVDPI VLPHIKAIAN AMFACEYDQP FCEAFIGVQR EALEEYMVTL EMERFSCVDV LRMDWEDLNG AMRKWTKVVK IITQVYLASE KQLCDQILGD
301: FESISTACFI EISKDAILSL LNFGEAVVLR SCKPEMLERF LSMYEVSAEI LVDVDNLFPD ETGSSLRIAF HNLSKKLADH TTTTFLKFKD AIASDESTRP
401: FHGGGIHHLT RYVMNYLKLL PEYTDSLNSL LQNIHVDDSI PEKTGEDVLP STFSPMARHL RSIVTTLESS LERKAQLYAD EALKSIFLMN NFRYMVQKVK
501: GSELRRLFGD EWIRKHIASY QCNVTNYERS TWSSILALLR DNNDSVRTLR ERCRLFSLAF DDVYKNQTRW SVPDSELRDD LHISTSVKVV QSYRGFLGRN
601: AVRIGEKHIR YTCEDIENML LDLFECLPSP RSLRSSRKR

Arabidopsis Description

ATEXO70E2Exocyst complex component EXO70E2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNR3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.